G112295


Basic Information

Item Value
gene id G112295
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 19626813 ~ 19628164 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU140622
actttaattaaatatacacattttatcaGCAAACAGAGCACTACAAAATTACATATTCaatttgcaaaaatgtaaagCCATTAAATATTACAGTTAATGCATTCAATTAACAATGTGCAATTCATAAACAGCCCTTTATGAGACATGTTTGCAATTGCAAGTCTGGATCATATTGGACCGTTCTGCGTGTACAAACAATTGGCTCTAAATAGGTAAATTGGTAAAATAAGTTTTACAACATCACTTCCCCCCCATACCAGATGGAAACAATGGCCTTAATCCCCAGCTGTGGACTAAATTAGTACACTAATAGAAACCTACCATTCTCAAGTTCTAACTGTAATGTTCGTTGCAATTGGAACTGGATATGATCATCTAGAAAGTAGCATATTATCTGTTCTCAAGTTAGACCACTAGGTGCATACCAAATATCAGCCCTGTGCAGTGAGCTGTTGAAGTGAATGGCATTGAAGGCCAATTGACTGCACTGTTTGAAGCAAATGTGGAACTGGAGAGACAGCAGGTGACAGAGCAGCTATAATACCTGGGCTAGCAGGGAATTTGAATATTGCTACAGTAAATATACGTTGGAagatattatttgcattttggcCTTCCGAGACTAAACGTTACTGGAGAGAAATCCATATTGAGTCTGAACCGTCCACATAACCCTATGTTTAATGGAACAATGCTatgaatacaaagaatataaaacaatgcTATGTCCCTAGAAAGCAATAGCTATGTTAGTAGGTATGTCATATGAAAAGTGATGTGAAAGACACAGCTAATCTGATTGTAATACACTTCCAAAGGGGCACATGatgaattacattacataagCACAAGATTTAGATTTCCCCCAAGTATACTTACAAGTATTATTACGGAGGCGCAAATCATAACGATGCAAATGGCCAAGAAGACATTCACAGGTTTCGGAGGTACATTAGGGAAGACAAAAGAACTAATAATTGTTAATAACTAGTAAGGATGTGAGGCCACCAACTATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU140622 True 1016 lncRNA 0.37 2 19626813 19628164

Neighbor

gene id symbol gene type direction distance location
AMCG00006770 LOC106594134 coding upstream 5527 19611319 ~ 19621286 (+)
AMCG00006772 grm3,LOC107090533 coding upstream 58055 19555403 ~ 19568758 (+)
AMCG00006769 LOC108263977,LOC108444204,LOC107665551,LOC107559415 coding upstream 84847 19537333 ~ 19541966 (+)
AMCG00006752 LOC107577127 coding upstream 1226622 18368664 ~ 18400191 (+)
AMCG00006753 NA coding upstream 1287356 18317693 ~ 18339457 (+)
AMCG00006771 NA coding downstream 7953 19636117 ~ 19642171 (+)
AMCG00006779 NA coding downstream 18966 19647130 ~ 19650694 (+)
AMCG00006778 fam107b,LOC102787157 coding downstream 69267 19697431 ~ 19706930 (+)
AMCG00006783 NA coding downstream 243842 19872006 ~ 19874589 (+)
AMCG00006781 NA coding downstream 256558 19884722 ~ 19933196 (+)
G112275 NA non-coding upstream 131048 19495534 ~ 19495765 (+)
G112259 NA non-coding upstream 230616 19395917 ~ 19396197 (+)
G112233 NA non-coding upstream 526415 19095628 ~ 19100398 (+)
G112207 NA non-coding upstream 723270 18900939 ~ 18903543 (+)
G112182 NA non-coding upstream 881596 18695159 ~ 18745217 (+)
G112302 NA non-coding downstream 5075 19633239 ~ 19635224 (+)
G112305 NA non-coding downstream 15487 19643651 ~ 19645956 (+)
G112350 NA non-coding downstream 312329 19940493 ~ 19940975 (+)
G112380 NA non-coding downstream 354841 19983005 ~ 19983296 (+)
G112424 NA non-coding downstream 647829 20275993 ~ 20276232 (+)
AMCG00006672 NA other upstream 5687338 13933666 ~ 13939475 (+)
G111197 NA other upstream 6583365 13011184 ~ 13043448 (+)
AMCG00006636 NA other upstream 6974998 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 7303535 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 10058537 9563952 ~ 9568276 (+)
AMCG00006811 NA other downstream 1309333 20937497 ~ 20944977 (+)
G112567 NA other downstream 1420172 21048336 ~ 21049038 (+)
G112600 NA other downstream 1514701 21142865 ~ 21203201 (+)
AMCG00006820 NA other downstream 1637089 21265253 ~ 21304878 (+)
AMCG00006829 NA other downstream 1989468 21617632 ~ 21622508 (+)

Expression


Co-expression Network