G112350


Basic Information

Item Value
gene id G112350
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 19940493 ~ 19940975 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU140697
gctgCAATAAAATCTAGAATGTGGGCTGCTTATCCTGACTAGTACAGGGGAACACTTCCTCACACTACCCaagtgtctttaaaaacatatgtgGATCGAATTAAATCACTTTATCTTCCTATCTTGACATACAGAAAGCTGCAAGGCATTTTTACAGTGTATGTAGTCTGAACTTTTTTTCAACTGGGCTAATTTGTAATCCAGTGCAATTCTATTCGTCTGTTTATTCTAGATGACATTTGTTTGCAGCCTTCCTGTAGCCTACAAGATATTTGGATCCAATCTGAAAGATAAGATTAATCTTTCAGTCATCTCTTCCATTTAACCAAACCAGCAAGAATTACTCTTGACAGCGTGGACACGTCATGATCTAAACATCCAACCGCATGGTCTTGCTTTTAGATAGTTTTAAAAGCTTGAAAGCGTTTAATGGCATCACATCTTAAAAGAACGATAACCTTTGCTTGCATTGAACATTGTCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU140697 True 483 lncRNA 0.37 1 19940493 19940975

Neighbor

gene id symbol gene type direction distance location
AMCG00006781 NA coding upstream 7297 19884722 ~ 19933196 (+)
AMCG00006783 NA coding upstream 65904 19872006 ~ 19874589 (+)
AMCG00006778 fam107b,LOC102787157 coding upstream 233563 19697431 ~ 19706930 (+)
AMCG00006779 NA coding upstream 289799 19647130 ~ 19650694 (+)
AMCG00006771 NA coding upstream 298322 19636117 ~ 19642171 (+)
AMCG00006784 NA coding downstream 8166 19949141 ~ 19955839 (+)
AMCG00006782 sephs1,LOC106573416 coding downstream 25054 19966029 ~ 19971398 (+)
AMCG00006786 NA coding downstream 55549 19996524 ~ 19999748 (+)
AMCG00006787 NA coding downstream 74970 20015945 ~ 20047024 (+)
AMCG00006791 NA coding downstream 321325 20262300 ~ 20262799 (+)
G112305 NA non-coding upstream 294537 19643651 ~ 19645956 (+)
G112302 NA non-coding upstream 305269 19633239 ~ 19635224 (+)
G112295 NA non-coding upstream 312329 19626813 ~ 19628164 (+)
G112275 NA non-coding upstream 444728 19495534 ~ 19495765 (+)
G112259 NA non-coding upstream 544296 19395917 ~ 19396197 (+)
G112380 NA non-coding downstream 42030 19983005 ~ 19983296 (+)
G112424 NA non-coding downstream 335018 20275993 ~ 20276232 (+)
G112430 NA non-coding downstream 596968 20537943 ~ 20538220 (+)
G112435 NA non-coding downstream 622082 20563057 ~ 20563275 (+)
G112436 NA non-coding downstream 622523 20563498 ~ 20563788 (+)
AMCG00006672 NA other upstream 6001018 13933666 ~ 13939475 (+)
G111197 NA other upstream 6897045 13011184 ~ 13043448 (+)
AMCG00006636 NA other upstream 7288678 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 7617215 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 10372217 9563952 ~ 9568276 (+)
AMCG00006811 NA other downstream 996522 20937497 ~ 20944977 (+)
G112567 NA other downstream 1107361 21048336 ~ 21049038 (+)
G112600 NA other downstream 1201890 21142865 ~ 21203201 (+)
AMCG00006820 NA other downstream 1324278 21265253 ~ 21304878 (+)
AMCG00006829 NA other downstream 1676657 21617632 ~ 21622508 (+)

Expression


Co-expression Network