Gene
RNA
| Item | Value |
|---|---|
| gene id | G112380 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 19983005 ~ 19983296 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU140733 | True | 292 | lncRNA | 0.59 | 1 | 19983005 | 19983296 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006782 | sephs1,LOC106573416 | coding | upstream | 11607 | 19966029 ~ 19971398 (+) |
| AMCG00006784 | NA | coding | upstream | 27166 | 19949141 ~ 19955839 (+) |
| AMCG00006781 | NA | coding | upstream | 49809 | 19884722 ~ 19933196 (+) |
| AMCG00006783 | NA | coding | upstream | 108416 | 19872006 ~ 19874589 (+) |
| AMCG00006778 | fam107b,LOC102787157 | coding | upstream | 276075 | 19697431 ~ 19706930 (+) |
| AMCG00006786 | NA | coding | downstream | 13228 | 19996524 ~ 19999748 (+) |
| AMCG00006787 | NA | coding | downstream | 32649 | 20015945 ~ 20047024 (+) |
| AMCG00006791 | NA | coding | downstream | 279004 | 20262300 ~ 20262799 (+) |
| AMCG00006792 | shank3a,LOC107710388 | coding | downstream | 361105 | 20344401 ~ 20355364 (+) |
| AMCG00006794 | NA | coding | downstream | 548059 | 20531355 ~ 20535351 (+) |
| G112350 | NA | non-coding | upstream | 42030 | 19940493 ~ 19940975 (+) |
| G112305 | NA | non-coding | upstream | 337049 | 19643651 ~ 19645956 (+) |
| G112302 | NA | non-coding | upstream | 347781 | 19633239 ~ 19635224 (+) |
| G112295 | NA | non-coding | upstream | 354841 | 19626813 ~ 19628164 (+) |
| G112275 | NA | non-coding | upstream | 487240 | 19495534 ~ 19495765 (+) |
| G112424 | NA | non-coding | downstream | 292697 | 20275993 ~ 20276232 (+) |
| G112430 | NA | non-coding | downstream | 554647 | 20537943 ~ 20538220 (+) |
| G112435 | NA | non-coding | downstream | 579761 | 20563057 ~ 20563275 (+) |
| G112436 | NA | non-coding | downstream | 580202 | 20563498 ~ 20563788 (+) |
| G112438 | NA | non-coding | downstream | 582230 | 20565526 ~ 20571427 (+) |
| AMCG00006672 | NA | other | upstream | 6043530 | 13933666 ~ 13939475 (+) |
| G111197 | NA | other | upstream | 6939557 | 13011184 ~ 13043448 (+) |
| AMCG00006636 | NA | other | upstream | 7331190 | 12620062 ~ 12651815 (+) |
| AMCG00006624 | NA | other | upstream | 7659727 | 12145745 ~ 12323278 (+) |
| AMCG00006565 | LOC103366858,LOC103380581 | other | upstream | 10414729 | 9563952 ~ 9568276 (+) |
| AMCG00006811 | NA | other | downstream | 954201 | 20937497 ~ 20944977 (+) |
| G112567 | NA | other | downstream | 1065040 | 21048336 ~ 21049038 (+) |
| G112600 | NA | other | downstream | 1159569 | 21142865 ~ 21203201 (+) |
| AMCG00006820 | NA | other | downstream | 1281957 | 21265253 ~ 21304878 (+) |
| AMCG00006829 | NA | other | downstream | 1634336 | 21617632 ~ 21622508 (+) |
