G112424


Basic Information

Item Value
gene id G112424
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 20275993 ~ 20276232 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU140780
caaggaaggaaaagcagtgaaccagcgacagggtcatgggcggccaaggctcattgatgcacgtggggagcgaaggctggcctgtgtggtccgatccaacagacgagctactgtagctcaaattgctgaaaaagtgaatgctggttctgatagaaaggtgtcagaacacacagtgcatcgcagtttgttgcgtatggggctgcgtagccgcagaccagtcagggtgcccatgctgacccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU140780 True 240 lncRNA 0.55 1 20275993 20276232

Neighbor

gene id symbol gene type direction distance location
AMCG00006791 NA coding upstream 13194 20262300 ~ 20262799 (+)
AMCG00006787 NA coding upstream 228969 20015945 ~ 20047024 (+)
AMCG00006786 NA coding upstream 276245 19996524 ~ 19999748 (+)
AMCG00006782 sephs1,LOC106573416 coding upstream 304595 19966029 ~ 19971398 (+)
AMCG00006784 NA coding upstream 320154 19949141 ~ 19955839 (+)
AMCG00006792 shank3a,LOC107710388 coding downstream 68169 20344401 ~ 20355364 (+)
AMCG00006794 NA coding downstream 255123 20531355 ~ 20535351 (+)
AMCG00006793 NA coding downstream 268245 20544477 ~ 20562876 (+)
AMCG00006797 LOC104957567 coding downstream 344510 20620742 ~ 20628623 (+)
AMCG00006798 lamtor4,si:dkey-159a18.7,LOC107557308,LOC107590499,LOC107694163 coding downstream 368997 20645229 ~ 20647241 (+)
G112380 NA non-coding upstream 292697 19983005 ~ 19983296 (+)
G112350 NA non-coding upstream 335018 19940493 ~ 19940975 (+)
G112305 NA non-coding upstream 630037 19643651 ~ 19645956 (+)
G112302 NA non-coding upstream 640769 19633239 ~ 19635224 (+)
G112295 NA non-coding upstream 647829 19626813 ~ 19628164 (+)
G112430 NA non-coding downstream 261711 20537943 ~ 20538220 (+)
G112435 NA non-coding downstream 286825 20563057 ~ 20563275 (+)
G112436 NA non-coding downstream 287266 20563498 ~ 20563788 (+)
G112438 NA non-coding downstream 289294 20565526 ~ 20571427 (+)
G112465 NA non-coding downstream 362464 20638696 ~ 20638986 (+)
AMCG00006672 NA other upstream 6336518 13933666 ~ 13939475 (+)
G111197 NA other upstream 7232545 13011184 ~ 13043448 (+)
AMCG00006636 NA other upstream 7624178 12620062 ~ 12651815 (+)
AMCG00006624 NA other upstream 7952715 12145745 ~ 12323278 (+)
AMCG00006565 LOC103366858,LOC103380581 other upstream 10707717 9563952 ~ 9568276 (+)
AMCG00006811 NA other downstream 661265 20937497 ~ 20944977 (+)
G112567 NA other downstream 772104 21048336 ~ 21049038 (+)
G112600 NA other downstream 866633 21142865 ~ 21203201 (+)
AMCG00006820 NA other downstream 989021 21265253 ~ 21304878 (+)
AMCG00006829 NA other downstream 1341400 21617632 ~ 21622508 (+)

Expression


Co-expression Network