G112557


Basic Information

Item Value
gene id G112557
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 20997266 ~ 20997529 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU140964
ctcccagctccgggtgcccgtgttggtcccgtcgatcgtgatccccagaaccttgatggacggcttcacagggaacacggtcggcgGGCCCCTGCCGACAGGCCATGCtctggagaggtagacctcgctcttggccctattgacagcggcccccgtcaccctgcagaagccgtccagcagttcctcaaccctggccacGGACGGCGCTTCCGTGCAGACCACGGCCACgtcgtccatataggccagggctttcagttgctctcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
ko04913 Ovarian steroidogenesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU140964 True 264 lncRNA 0.65 1 20997266 20997529

Neighbor

gene id symbol gene type direction distance location
AMCG00006810 NA coding downstream 63051 20919534 ~ 20934215 (-)
AMCG00006808 NA coding downstream 153046 20767762 ~ 20844220 (-)
AMCG00006806 dennd6b coding downstream 289308 20689392 ~ 20707958 (-)
AMCG00006805 zgc:77650,arf5,LOC107559620,LOC107599973,LOC105888566,LOC107599983,LOC105912562 coding downstream 330321 20656253 ~ 20666945 (-)
AMCG00006800 NA coding downstream 359662 20627532 ~ 20637604 (-)
AMCG00006814 st8sia1 coding upstream 34869 21032398 ~ 21048481 (-)
AMCG00006812 NA coding upstream 57411 21054940 ~ 21088079 (-)
AMCG00006816 NA coding upstream 109681 21107210 ~ 21129674 (-)
AMCG00006817 NA coding upstream 166443 21163972 ~ 21172849 (-)
AMCG00006819 wash1,LOC103045331,LOC107662897,LOC107735466 coding upstream 205522 21203051 ~ 21235769 (-)
G112496 NA non-coding downstream 240480 20714083 ~ 20756786 (-)
G112410 NA non-coding downstream 917855 20078891 ~ 20079411 (-)
G112292 NA non-coding downstream 1427594 19568517 ~ 19569672 (-)
G112290 grm3,LOC107090533,LOC106924857 non-coding downstream 1431251 19564956 ~ 19566015 (-)
G112289 grm3,LOC108263977,LOC108444204 non-coding downstream 1455298 19541103 ~ 19541968 (-)
G112562 NA non-coding upstream 17844 21015373 ~ 21016048 (-)
G112563 NA non-coding upstream 19672 21017201 ~ 21017740 (-)
G112568 NA non-coding upstream 27177 21024706 ~ 21031872 (-)
G112589 NA non-coding upstream 97812 21095341 ~ 21096308 (-)
G112705 NA non-coding upstream 812836 21810365 ~ 21853012 (-)
AMCG00006813 NA other downstream 32704 20854057 ~ 20964562 (-)
AMCG00006807 NA other downstream 343607 20647320 ~ 20653659 (-)
G112420 NA other downstream 761060 20235856 ~ 20236206 (-)
AMCG00006774 meig1,LOC107581293,LOC107744135,LOC107592215 other downstream 1361341 19633093 ~ 19635925 (-)
AMCG00006773 tmem243b,tmem243 other downstream 1365371 19623155 ~ 19631895 (-)
AMCG00006841 NA other upstream 1132966 22130495 ~ 22197664 (-)
AMCG00006854 NA other upstream 1955647 22953176 ~ 22958306 (-)
G113050 NA other upstream 2406646 23404175 ~ 23407207 (-)
AMCG00006866 NA other upstream 2570626 23568155 ~ 23571133 (-)
G113530 NA other upstream 5502486 26500015 ~ 26500681 (-)

Expression


Co-expression Network