G112705


Basic Information

Item Value
gene id G112705
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 21810365 ~ 21853012 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU141146
TTGGTTCTATTCACTTTATTTCAGTACGtattactaatacaaaataatctgtACAAAGGCTAAAGTAGGTGTTTTTGCATAGAAGGAACCGTGATGTGAAACATAACTTGGATGGAATGGCACATTAAAGTCTATTAACTAACACACACAAGAAGTTTCCATATCCACCTAAACAATGAGTAACAAGCTCGGTACAAAAATATTCCTGCGCGCACTTCCAATGGTAAAAATACTACAACACAATGCTTCTTTcctattttatttagaaagttatgttttcccccttctttatattcatttattaatttttgtattcctttaaacaccataagaaaaaaaacaaaaacaagcagtcCTCTTGTTTTCTGCACTCCTGatgaaaacacaatgacaaTAACGTTCACATGAGGGCTGGGGCTTTTGAAGAAGATACCGCTCTTTTTTCGTTGCACCCCTTGGCGGAGACAGCCAAAGCCGGGGGCTCAAAGAGTCTCGCCAGTATTCAGTCACAAGCCCACATGTTGTTGCTGGTTATGcatgattaaatacaattaaaaatatattattgaaaagGAAGTcaacaacattaacaacaggaaaatgaaaacaaaataatcgaCAGCATTCATTTCTTCACAACATTACTTGAAAGGCAATGAATGGGTTTTTAACGACAAGCTTTTCATTtgacaaaaaaagaataaagtaTTATACCAACTCTCAGAGATGTTCAGAGTGCATTTCATTTACAAACAACAAACGGGACAAGACTtgtgaaataatacagtatCAGAGTATTCATGGCAACGCCCATCGTAACAGGACCAAGAGCTTGACTTTGTTGTATTGCTAAAGGCTTGCAACACcttgttaaaaataaaggtGGGAGgcattcttgtttttctcctccCTCATCCCCTGCCCCATACAGGATCTAGagcattattgtatttttgctgtttttcagtggcagtATTTACGTAATAAAGTGAGAAATTTTAAGAACatcatttgtgtcttttgttaaatgcataaaaactgCATCTagtgcagatttaaaatatatataaaaaaatgtccctcctttaaacatttgaatagttATACTAcaactggaataaaaaaatacaaaagaaaaaaaaaatgttttcattccttTATTGTCTTTGGCGGTTACATATAACTTGCCTGAGATCAGTCCATCCTGCACaggtatatataaaaaggtaaCCCACATGGACTGTTAAAAGTCTGCTGGTTGCCAACATATTGGTGAAAATCCAATTCCTACCATGACTAGGACTAGAAAACAAAAGCTCTCCTGCTTTCTGGTTACAGATCACAAATACTGCAAGATGCCAATGATGTTGAAGACCTAGTAAGAAAAGACTGATCTGATTTCAGAGTTCAAGGTCAATTTTCTCAAATTACCACAGTCATTAAAAAGACAAGATTATTCCATAGGATTTGCATCACATAATGCTGGTTAACCCAGCTCAGCTTCTTTTAAAaattacactgaaaatacacaaaaatgtgttgGTCATGTAGGGAAGCATATGTGACTCAGCACTGGTTGGTTTTTGTACAGAAATCCTGTACAGTTTAACACTGATCAgcttacaatttacacaatagttcaaaatgtaaggaaaacaacaaaaacaaagcacagttcaccttttaaatgtatttttctttcttggatTACAGCCACTAGCAAAAGTAGTATATTGTAATTGGATCTGCCCTGTGCACACTTCAGCTCATAGGTTTCCCCAAATGCCtgtcatttcaaatgtgtttaagaCAGAAAGGTTGTCAGCTTGAACTCAGAGGTTTCCATAGTGAGGTACTTCTGATTCATGTCACCTCTCCTAATTATTTCCAAGGAACTAATATAAATTGTgacactctctctgtcttcctaGGCAATCAAACAAACCGGAGAGCTGTGTTGAACTGACAGATACTTTTGAGCGTTTACATACACTTTGTACACAATTCAATTTTGGTTCAATCAAGCATGGAGTATTGCTGTAGCAAAAACATGAAAGGATGGGATCCGGTGACAAATACCTGTCAGACTGCACACATGAacaacactgtaaataaaatgcactcCGTCAAAGACACGTTCTTCTGAAGAACATGATTCTAAATCACAGCCTAATAGAGCTTAAAAATCAATCTCTATGTATTTTATCCGCTGAAATACAGTATACGAGGTTTGACAAAGGAAGCTGAAGTATTTAGGACCTGTATGTTAAGATTTTCTACACAGTTAAGGCTGCTTTTGACCATTTTGGGACTGACAAGATGAACGTATATTAGTCACTCCAGGCATAGTAATTTCAAACCTTGAATACAGTAATTGAAGCATTTTAGATTGTTAACAAAATGCACCTTGCAATCTTCAAAACCTCAGATCAGGccatatatagaaatatatcaATGTAACTGCTCTCTCTTCAGTTCAAATGCTTCATATAAATCAGCGAGAGACCGCCCTGCTCTTTCAGCCCAGCATGGTGGCAAAGCTGTAGCGAACTTACACACACCACTTCATATATAACAGTTGTGTTCAAGTGAGGGACAGCATATAATTTTGCGGGGAAAACCAAGTGCTGCCCCTTTGGTTGAGGGGCTGAAATTAAATGGTAGACTTCATTTCCAGACACACGGCAAGTCcaaattgaaacattaaatcAGTCTTATGCTTCACCATTGAGTGGGGGGATGTTTAATTACTTGGAAAATGGCACCTGCCAGGGcgtgaaaaaacaaaagtctgcCGCAACTGTTACGTCTCCTGGGGGCATCAGAGGCAGCTGAGAAAAGCAccatttctaaataaaacctGGATTTTGGCAACAGCTCAGCACTTTCCGAAACTGTCTTCATCGTTATTCAGACGTGAAACGACCGGTGCGTTCTCGAGACGGGACGCAATCCGCTCGCAAAGGCTAAGGTGACAAAACACAGATGTCGGCCCCCTGCAAAGGCGTGATGGTGTCACAGCGTCGGCTCCCCTTGCCGCTAAGTATTGTCATACAAACTTCACCCAAAAGAAGatcatgcatgttttctttttttttttttttttttttttttttttttttttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141146 True 3127 lncRNA 0.37 2 21810365 21853012

Neighbor

gene id symbol gene type direction distance location
AMCG00006826 LOC100700740,LOC101481124,LOC102199940 coding downstream 216644 21559785 ~ 21593721 (-)
AMCG00006821 NA coding downstream 375178 21414320 ~ 21435187 (-)
AMCG00006819 wash1,LOC103045331,LOC107662897,LOC107735466 coding downstream 574596 21203051 ~ 21235769 (-)
AMCG00006817 NA coding downstream 637516 21163972 ~ 21172849 (-)
AMCG00006816 NA coding downstream 680691 21107210 ~ 21129674 (-)
AMCG00006832 NA coding upstream 13875 21866887 ~ 21877250 (-)
AMCG00006837 NA coding upstream 166880 22019892 ~ 22049178 (-)
AMCG00006838 NA coding upstream 205232 22058244 ~ 22128302 (-)
AMCG00006839 NA coding upstream 346954 22199966 ~ 22202511 (-)
AMCG00006840 LOC105913426,LOC108429453 coding upstream 354651 22207663 ~ 22230259 (-)
G112589 NA non-coding downstream 714057 21095341 ~ 21096308 (-)
G112568 NA non-coding downstream 778493 21024706 ~ 21031872 (-)
G112563 NA non-coding downstream 792625 21017201 ~ 21017740 (-)
G112562 NA non-coding downstream 794317 21015373 ~ 21016048 (-)
G112557 NA non-coding downstream 812836 20997266 ~ 20997529 (-)
G112783 NA non-coding upstream 201610 22054622 ~ 22058136 (-)
G112809 NA non-coding upstream 404537 22257549 ~ 22257974 (-)
G112878 akr1d1,LOC106917221,LOC103465917,LOC103134490,LOC106953618 non-coding upstream 816848 22669860 ~ 22670883 (-)
G112903 NA non-coding upstream 913261 22766273 ~ 22772685 (-)
G112953 NA non-coding upstream 1088447 22941459 ~ 22941670 (-)
AMCG00006813 NA other downstream 845803 20854057 ~ 20964562 (-)
AMCG00006807 NA other downstream 1156706 20647320 ~ 20653659 (-)
G112420 NA other downstream 1574159 20235856 ~ 20236206 (-)
AMCG00006774 meig1,LOC107581293,LOC107744135,LOC107592215 other downstream 2174440 19633093 ~ 19635925 (-)
AMCG00006773 tmem243b,tmem243 other downstream 2178470 19623155 ~ 19631895 (-)
AMCG00006841 NA other upstream 277483 22130495 ~ 22197664 (-)
AMCG00006854 NA other upstream 1100164 22953176 ~ 22958306 (-)
G113050 NA other upstream 1551163 23404175 ~ 23407207 (-)
AMCG00006866 NA other upstream 1715143 23568155 ~ 23571133 (-)
G113530 NA other upstream 4647003 26500015 ~ 26500681 (-)

Expression


Co-expression Network