G112756 (LOC108412581)


Basic Information

Item Value
gene id G112756
gene name LOC108412581
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 22063704 ~ 22064035 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU141220
TGCAGAGAATGGGCTGAGTCCCTGAGCAGGGGTGTAGGGGGAGCCCCACTGGCCCGTGCCCACTCCCCTGGAGGTCCGGGGAGGGGGGCTGGAACTGGGCGGCCCTGAGGTCACTCCGGGCAGAGTTATGCCAGCGTTGCTGCCCTGGGAAGTGGGCGCCACCAGAGCAAAGGCGTCATCCAGGAGGGAGTGCATCTGCTGCCGGGCCTCCTCGATGGAGGGCTGAGGGGGGACGTAGGAAGGCGGAGGCGGTGCGTGGCCTGGGGGCGGGGAGCCGGCGAAGACCTCGTTGTCTTGAGGAGAGGGGCTCCGGGGCTCGGGAGGCTGGTCAG

Function

NR:

description
PREDICTED: UPF0606 protein KIAA1549-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141220 True 332 lncRNA 0.70 1 22063704 22064035

Neighbor

gene id symbol gene type direction distance location
AMCG00006835 NA coding upstream 49873 22004352 ~ 22013831 (+)
AMCG00006834 NA coding upstream 63978 21996225 ~ 21999726 (+)
AMCG00006836 LOC108264267,LOC107559327,LOC108414616 coding upstream 69376 21937375 ~ 21994328 (+)
AMCG00006831 LOC100694777,LOC104940279,LOC101482493,LOC106573176 coding upstream 195468 21855901 ~ 21868236 (+)
AMCG00006830 LOC105018129,LOC106573177,LOC106561385,LOC107587031,LOC107738414 coding upstream 210687 21835875 ~ 21853017 (+)
AMCG00006843 NA coding downstream 291545 22355580 ~ 22399845 (+)
AMCG00006842 LOC105018463,LOC106560992,LOC106584495,LOC107701192,LOC103380318,LOC105913395,LOC101155025,LOC105938539 coding downstream 336059 22400094 ~ 22447422 (+)
AMCG00006844 akr1d1,LOC108425343,LOC105020260,LOC108240983,LOC102198112 coding downstream 588829 22652864 ~ 22672256 (+)
AMCG00006849 kdm5a coding downstream 625149 22689184 ~ 22714844 (+)
AMCG00006850 NA coding downstream 690653 22754688 ~ 22772629 (+)
G112755 NA non-coding upstream 4099 22059372 ~ 22059605 (+)
G112754 NA non-coding upstream 5218 22051678 ~ 22058486 (+)
G112573 NA non-coding upstream 1006731 21056350 ~ 21056973 (+)
G112566 NA non-coding upstream 1031720 21024279 ~ 21031984 (+)
G112564 NA non-coding upstream 1040425 21022933 ~ 21023279 (+)
G112757 NA non-coding downstream 1560 22065595 ~ 22065804 (+)
G112758 NA non-coding downstream 4186 22068221 ~ 22068423 (+)
G112762 NA non-coding downstream 73450 22137485 ~ 22211792 (+)
G112802 NA non-coding downstream 193515 22257550 ~ 22258386 (+)
G112807 NA non-coding downstream 230653 22294688 ~ 22311460 (+)
AMCG00006829 NA other upstream 441196 21617632 ~ 21622508 (+)
AMCG00006820 NA other upstream 758826 21265253 ~ 21304878 (+)
G112600 NA other upstream 860503 21142865 ~ 21203201 (+)
G112567 NA other upstream 1014666 21048336 ~ 21049038 (+)
AMCG00006811 NA other upstream 1118727 20937497 ~ 20944977 (+)
AMCG00006865 hipk2 other downstream 1445114 23509149 ~ 23554741 (+)
AMCG00006878 ndufb2,LOC102790702 other downstream 1968054 24032089 ~ 24036112 (+)
AMCG00006884 ccnd2a,ccnd2,LOC106573197,LOC106561356,LOC107575166,LOC107686624,LOC107732799 other downstream 2240661 24304696 ~ 24335916 (+)
AMCG00006893 ndufa9,LOC107572617,LOC107686627,LOC107732787 other downstream 2444968 24509003 ~ 24587119 (+)
G113369 LOC108442871 other downstream 3554032 25618067 ~ 25618445 (+)

Expression


Co-expression Network