G112758


Basic Information

Item Value
gene id G112758
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 22068221 ~ 22068423 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU141222
CTCCCTCTGCGCCGCGCTCCCCTTGAAACCTTGGACGAGGTTTTGGACTTGGGGCTGGGCACGTCGCCATTCTCTGATGGAGTCATTTCCTTCACCTGGACTGGGTGTGCTGACGGCTCCTGGATCACCAGGATGTTGTCTTTGCTGTGCTGCCCCAGGTGGAGCTTCGCAAAATCAAAGCCTTTGACACTGGGAGCCTGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141222 True 203 lncRNA 0.58 1 22068221 22068423

Neighbor

gene id symbol gene type direction distance location
AMCG00006835 NA coding upstream 54390 22004352 ~ 22013831 (+)
AMCG00006834 NA coding upstream 68495 21996225 ~ 21999726 (+)
AMCG00006836 LOC108264267,LOC107559327,LOC108414616 coding upstream 73893 21937375 ~ 21994328 (+)
AMCG00006831 LOC100694777,LOC104940279,LOC101482493,LOC106573176 coding upstream 199985 21855901 ~ 21868236 (+)
AMCG00006830 LOC105018129,LOC106573177,LOC106561385,LOC107587031,LOC107738414 coding upstream 215204 21835875 ~ 21853017 (+)
AMCG00006843 NA coding downstream 287157 22355580 ~ 22399845 (+)
AMCG00006842 LOC105018463,LOC106560992,LOC106584495,LOC107701192,LOC103380318,LOC105913395,LOC101155025,LOC105938539 coding downstream 331671 22400094 ~ 22447422 (+)
AMCG00006844 akr1d1,LOC108425343,LOC105020260,LOC108240983,LOC102198112 coding downstream 584441 22652864 ~ 22672256 (+)
AMCG00006849 kdm5a coding downstream 620761 22689184 ~ 22714844 (+)
AMCG00006850 NA coding downstream 686265 22754688 ~ 22772629 (+)
G112757 NA non-coding upstream 2417 22065595 ~ 22065804 (+)
G112756 LOC108412581 non-coding upstream 4186 22063704 ~ 22064035 (+)
G112755 NA non-coding upstream 8616 22059372 ~ 22059605 (+)
G112754 NA non-coding upstream 9735 22051678 ~ 22058486 (+)
G112573 NA non-coding upstream 1011248 21056350 ~ 21056973 (+)
G112762 NA non-coding downstream 69062 22137485 ~ 22211792 (+)
G112802 NA non-coding downstream 189127 22257550 ~ 22258386 (+)
G112807 NA non-coding downstream 226265 22294688 ~ 22311460 (+)
G112832 NA non-coding downstream 387339 22455762 ~ 22455964 (+)
G112868 NA non-coding downstream 614537 22682960 ~ 22683187 (+)
AMCG00006829 NA other upstream 445713 21617632 ~ 21622508 (+)
AMCG00006820 NA other upstream 763343 21265253 ~ 21304878 (+)
G112600 NA other upstream 865020 21142865 ~ 21203201 (+)
G112567 NA other upstream 1019183 21048336 ~ 21049038 (+)
AMCG00006811 NA other upstream 1123244 20937497 ~ 20944977 (+)
AMCG00006865 hipk2 other downstream 1440726 23509149 ~ 23554741 (+)
AMCG00006878 ndufb2,LOC102790702 other downstream 1963666 24032089 ~ 24036112 (+)
AMCG00006884 ccnd2a,ccnd2,LOC106573197,LOC106561356,LOC107575166,LOC107686624,LOC107732799 other downstream 2236273 24304696 ~ 24335916 (+)
AMCG00006893 ndufa9,LOC107572617,LOC107686627,LOC107732787 other downstream 2440580 24509003 ~ 24587119 (+)
G113369 LOC108442871 other downstream 3549644 25618067 ~ 25618445 (+)

Expression


Co-expression Network