G112832


Basic Information

Item Value
gene id G112832
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 22455762 ~ 22455964 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU141317
GTGGGTGCCTTCCTCTAAAGCTGGTATTGTGAAGGTGTCAGAATCATTTGTTCATTGGCATATATTCTGCAAGCTAATGCTTCTGGTCTAATTCACACCGGGAGCGACGTGTCTGCTTTTCAAATAAACTCCAgactggggagagagaaagagaaaaaaaaaagctgcaaagTAACGCAACCACTGAATGAATTGAGGAGTCT

Function

GO:

id name namespace
GO:0005179 hormone activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141317 True 203 lncRNA 0.43 1 22455762 22455964

Neighbor

gene id symbol gene type direction distance location
AMCG00006842 LOC105018463,LOC106560992,LOC106584495,LOC107701192,LOC103380318,LOC105913395,LOC101155025,LOC105938539 coding upstream 8340 22400094 ~ 22447422 (+)
AMCG00006843 NA coding upstream 55917 22355580 ~ 22399845 (+)
AMCG00006835 NA coding upstream 441931 22004352 ~ 22013831 (+)
AMCG00006834 NA coding upstream 456036 21996225 ~ 21999726 (+)
AMCG00006836 LOC108264267,LOC107559327,LOC108414616 coding upstream 461434 21937375 ~ 21994328 (+)
AMCG00006844 akr1d1,LOC108425343,LOC105020260,LOC108240983,LOC102198112 coding downstream 196900 22652864 ~ 22672256 (+)
AMCG00006849 kdm5a coding downstream 233220 22689184 ~ 22714844 (+)
AMCG00006850 NA coding downstream 298724 22754688 ~ 22772629 (+)
AMCG00006851 usp15 coding downstream 318756 22774720 ~ 22805606 (+)
AMCG00006853 NA coding downstream 353339 22809303 ~ 22817363 (+)
G112807 NA non-coding upstream 144302 22294688 ~ 22311460 (+)
G112802 NA non-coding upstream 197376 22257550 ~ 22258386 (+)
G112762 NA non-coding upstream 243970 22137485 ~ 22211792 (+)
G112758 NA non-coding upstream 387339 22068221 ~ 22068423 (+)
G112757 NA non-coding upstream 389958 22065595 ~ 22065804 (+)
G112868 NA non-coding downstream 226996 22682960 ~ 22683187 (+)
G112938 NA non-coding downstream 408021 22863985 ~ 22864508 (+)
G112940 NA non-coding downstream 421425 22877389 ~ 22881356 (+)
G112954 NA non-coding downstream 497216 22953180 ~ 22956200 (+)
G112955 LOC105913372 non-coding downstream 501284 22957248 ~ 22958605 (+)
AMCG00006829 NA other upstream 833254 21617632 ~ 21622508 (+)
AMCG00006820 NA other upstream 1150884 21265253 ~ 21304878 (+)
G112600 NA other upstream 1252561 21142865 ~ 21203201 (+)
G112567 NA other upstream 1406724 21048336 ~ 21049038 (+)
AMCG00006811 NA other upstream 1510785 20937497 ~ 20944977 (+)
AMCG00006865 hipk2 other downstream 1053185 23509149 ~ 23554741 (+)
AMCG00006878 ndufb2,LOC102790702 other downstream 1576125 24032089 ~ 24036112 (+)
AMCG00006884 ccnd2a,ccnd2,LOC106573197,LOC106561356,LOC107575166,LOC107686624,LOC107732799 other downstream 1848732 24304696 ~ 24335916 (+)
AMCG00006893 ndufa9,LOC107572617,LOC107686627,LOC107732787 other downstream 2053039 24509003 ~ 24587119 (+)
G113369 LOC108442871 other downstream 3162103 25618067 ~ 25618445 (+)

Expression


Co-expression Network