G112868


Basic Information

Item Value
gene id G112868
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 22682960 ~ 22683187 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU141360
cctccctcatctctcactgctgatgatttcgcctccttcttctccaagattgcagacatccacaggctcttcaatactccaccctcatctcccatcacaccgaaacctcccaccgacctagcttccttttcttcattctcacctctctcagatgctgaagtttctgctctcctcctacgtcacaaacccacaacatgcgacctggaccctctcccttctcatctcttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141360 True 228 lncRNA 0.51 1 22682960 22683187

Neighbor

gene id symbol gene type direction distance location
AMCG00006844 akr1d1,LOC108425343,LOC105020260,LOC108240983,LOC102198112 coding upstream 10704 22652864 ~ 22672256 (+)
AMCG00006842 LOC105018463,LOC106560992,LOC106584495,LOC107701192,LOC103380318,LOC105913395,LOC101155025,LOC105938539 coding upstream 235538 22400094 ~ 22447422 (+)
AMCG00006843 NA coding upstream 283115 22355580 ~ 22399845 (+)
AMCG00006835 NA coding upstream 669129 22004352 ~ 22013831 (+)
AMCG00006834 NA coding upstream 683234 21996225 ~ 21999726 (+)
AMCG00006849 kdm5a coding downstream 5997 22689184 ~ 22714844 (+)
AMCG00006850 NA coding downstream 71501 22754688 ~ 22772629 (+)
AMCG00006851 usp15 coding downstream 91533 22774720 ~ 22805606 (+)
AMCG00006853 NA coding downstream 126116 22809303 ~ 22817363 (+)
AMCG00006852 mon2 coding downstream 143796 22826983 ~ 22862037 (+)
G112832 NA non-coding upstream 226996 22455762 ~ 22455964 (+)
G112807 NA non-coding upstream 371500 22294688 ~ 22311460 (+)
G112802 NA non-coding upstream 424574 22257550 ~ 22258386 (+)
G112762 NA non-coding upstream 471168 22137485 ~ 22211792 (+)
G112758 NA non-coding upstream 614537 22068221 ~ 22068423 (+)
G112938 NA non-coding downstream 180798 22863985 ~ 22864508 (+)
G112940 NA non-coding downstream 194202 22877389 ~ 22881356 (+)
G112954 NA non-coding downstream 269993 22953180 ~ 22956200 (+)
G112955 LOC105913372 non-coding downstream 274061 22957248 ~ 22958605 (+)
G113075 NA non-coding downstream 897328 23580515 ~ 23597219 (+)
AMCG00006829 NA other upstream 1060452 21617632 ~ 21622508 (+)
AMCG00006820 NA other upstream 1378082 21265253 ~ 21304878 (+)
G112600 NA other upstream 1479759 21142865 ~ 21203201 (+)
G112567 NA other upstream 1633922 21048336 ~ 21049038 (+)
AMCG00006811 NA other upstream 1737983 20937497 ~ 20944977 (+)
AMCG00006865 hipk2 other downstream 825962 23509149 ~ 23554741 (+)
AMCG00006878 ndufb2,LOC102790702 other downstream 1348902 24032089 ~ 24036112 (+)
AMCG00006884 ccnd2a,ccnd2,LOC106573197,LOC106561356,LOC107575166,LOC107686624,LOC107732799 other downstream 1621509 24304696 ~ 24335916 (+)
AMCG00006893 ndufa9,LOC107572617,LOC107686627,LOC107732787 other downstream 1825816 24509003 ~ 24587119 (+)
G113369 LOC108442871 other downstream 2934880 25618067 ~ 25618445 (+)

Expression


Co-expression Network