G113233


Basic Information

Item Value
gene id G113233
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 24410057 ~ 24410304 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU141814
TGCAAACACTAAGTAGCACAACACAGGAATTATGACGTGTTTACATTTTCCCACAGCTGGCATCAGGAATTAGGctgttaataaatatacatcctTAGCTTTTCACAAAACGTTGCCAAGAGTTtgtcattttcttaaaaaaatatttcctgtcCCTGTCAAGTGGTTTGAAAGCAGCTGGATGCATCATATAACACCATCCAGTTCTAACTAAACACTAAactacatacaaaatgtattaaactcaG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141814 True 248 lncRNA 0.35 1 24410057 24410304

Neighbor

gene id symbol gene type direction distance location
AMCG00006885 NA coding upstream 62694 24337908 ~ 24347363 (+)
AMCG00006879 NA coding upstream 387414 24018072 ~ 24022643 (+)
AMCG00006874 NA coding upstream 488934 23904764 ~ 23921123 (+)
AMCG00006869 NA coding upstream 781365 23623362 ~ 23628692 (+)
AMCG00006868 NA coding upstream 790664 23613000 ~ 23619393 (+)
AMCG00006888 NA coding downstream 30127 24440431 ~ 24447563 (+)
AMCG00006892 NA coding downstream 69714 24480018 ~ 24502346 (+)
AMCG00006894 NA coding downstream 240356 24650660 ~ 24653870 (+)
AMCG00006898 NA coding downstream 610826 25021130 ~ 25036473 (+)
AMCG00006899 NA coding downstream 630288 25040592 ~ 25041958 (+)
G113224 NA non-coding upstream 37222 24370718 ~ 24372835 (+)
G113159 NA non-coding upstream 121140 24076753 ~ 24288917 (+)
G113090 NA non-coding upstream 688425 23721382 ~ 23721632 (+)
G113075 NA non-coding upstream 812838 23580515 ~ 23597219 (+)
G112955 LOC105913372 non-coding upstream 1451452 22957248 ~ 22958605 (+)
G113283 NA non-coding downstream 263321 24673625 ~ 24676576 (+)
G113319 NA non-coding downstream 832261 25242565 ~ 25260402 (+)
G113357 NA non-coding downstream 981551 25391855 ~ 25395392 (+)
G113358 NA non-coding downstream 1010354 25420658 ~ 25420875 (+)
G113372 NA non-coding downstream 1278431 25688735 ~ 25689111 (+)
AMCG00006884 ccnd2a,ccnd2,LOC106573197,LOC106561356,LOC107575166,LOC107686624,LOC107732799 other upstream 74141 24304696 ~ 24335916 (+)
AMCG00006878 ndufb2,LOC102790702 other upstream 373945 24032089 ~ 24036112 (+)
AMCG00006865 hipk2 other upstream 855316 23509149 ~ 23554741 (+)
AMCG00006829 NA other upstream 2787549 21617632 ~ 21622508 (+)
AMCG00006820 NA other upstream 3105179 21265253 ~ 21304878 (+)
AMCG00006893 ndufa9,LOC107572617,LOC107686627,LOC107732787 other downstream 98699 24509003 ~ 24587119 (+)
G113369 LOC108442871 other downstream 1207763 25618067 ~ 25618445 (+)
G113400 NA other downstream 1404751 25815055 ~ 25832942 (+)

Expression


Co-expression Network