G113383


Basic Information

Item Value
gene id G113383
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 25722881 ~ 25724671 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU141987
tctaaaatgtcaGATACTGAAATGatccttgaaaaataaaacatttacagaatcCATTTGTTCATTTGAAACTTAACAAAAAAGGGCAGGATAGGGCAGGGCCGGCCTGTGGCATAAgcggaataggcaaatgctaggggcgCCCAAATGAGTgaagattcttttttttttttttttttactaataccGTTTTAATTCTATTAATTCGAAATATTACCCAAAAAAGCGAAAGCCCACACAACAACATAACTACAGCTTATTAGGCCATATGTTCCGTGTTGCCGCAGCGTCACCCCGGCCGGCCCATCAATCCCCCCGCTCTCATAGTCAGACTGACCTGCCTGTGGGGGGCGAGTTCAGTATCTGAAGCAGTGAGTGACACTGAACAGGAAACATGATCAATTAGCTTCAGTAGCCACTTCAAACCATGTCAAAAAGACCAAAGCCCTCTGGTGTCCTGGGAAGAAAAAGATGAGGAGGACAAACGGGATAAGGACAGAGGTGATGTGATGAAAGAATAGTTTATCTAATTGCATAGTTACCGTTGGAGCAGCGTTACTACTAGCTTACTTTGGACGATACTAGTAACGTCGCTCATTTAAATAGCTGGCTACAGTCATTGTCAGTTACTTTTACCTTAAATTAATTAGGGAATGTTGGAAAGACTACTCATGTGTTTGGGGAATAACCTGACCTGTAATGTTTTGAAGGGCAGTGGAAATGGCTTTTGTAATGACTCGCTTAACTTTACGTTTTTGCTCCACTGCCCGGTCCCTTAACAATTAGCCAATCAGAGCGCCGAACTGCCACGCCTGGAGATAATACACTTCCTGAGGTTTGAAAATAAGTTTACCCTGGCGATTTATGTTAAGTTAAGTTATAGTTAGGGTCTACAAAACGGAgagtaattgtttattattatatgattgtGTGCGGGCAGcacaatgtaaatgtttgtttgtttggtagAAGTTATTTGTGCTACATATTGAGAATAGCGATGCCAATCTGTTAACCAGCCGAGTCATTATCTACTGCGTCACCATGCGGTCGTAATGCGAACTGcattgatttataatatattatttattaccgTTATCTATTGTTTACATGCTTATTGAATTGAAGACAGTGTATTATCGATATGTATAACGGTTATAAGTTTATAAGATATAACCTTGGTTAAGGTCATTTCTCAGCATCTAGCTGTAGTAAGATAGCATAGATCCATAGGTTTGCATTTATGCTGCATGTAAAGTCATTTGTGTATATTAGCTCTGCTGTCAgaactgtgtatatttatattattattcttaacaTGATTATTggttatattgattattatacGACTGATATAcgttattgttatttctttgtagaaccatacatacatattcatcaaacttaatattacaattactgaaGACACCGTTTTGGATACAGTGCTAGTGATGCAATAAAGGGACACGGTTTGTAACTAATGAGAATTGTGCATTCTTACCGAAGCCCCACACCGATCACACCTTTTGAACGATCAGCTCTTTAACTCTTTCATCCAACTCCGTTACCTATAAcataattttgagaaatacaccttttctttcaagtgtgctgcaggaaccatccacttatttataattcgTTTTATGTCATTTGTTTGCTGCAAGGCAAAGGCAAGGCGAGTAAGGCTGTAGAACAATGctatattattcatattgcactaaggtgtctaatatagttttgttCGTTcaatactcttatttatattatatttataatttgttttatgtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141987 True 1791 lncRNA 0.37 1 25722881 25724671

Neighbor

gene id symbol gene type direction distance location
AMCG00006910 NA coding upstream 1268 25715827 ~ 25721613 (+)
AMCG00006905 fbxl14b,LOC106590767,LOC107580311,LOC107656333 coding upstream 382823 25336345 ~ 25340058 (+)
AMCG00006903 NA coding upstream 508521 25156086 ~ 25214360 (+)
AMCG00006901 NA coding upstream 608542 25078387 ~ 25114339 (+)
AMCG00006899 NA coding upstream 680923 25040592 ~ 25041958 (+)
AMCG00006916 NA coding downstream 85892 25810563 ~ 25822470 (+)
AMCG00006912 NA coding downstream 104803 25829474 ~ 25836610 (+)
AMCG00006911 NA coding downstream 126734 25851405 ~ 25861865 (+)
AMCG00006917 LOC107596953 coding downstream 187684 25912355 ~ 25937570 (+)
AMCG00006921 nup205 coding downstream 225015 25949686 ~ 25972112 (+)
G113373 NA non-coding upstream 25473 25697197 ~ 25697408 (+)
G113372 NA non-coding upstream 33770 25688735 ~ 25689111 (+)
G113358 NA non-coding upstream 302006 25420658 ~ 25420875 (+)
G113357 NA non-coding upstream 327489 25391855 ~ 25395392 (+)
G113319 NA non-coding upstream 462479 25242565 ~ 25260402 (+)
G113394 NA non-coding downstream 16312 25740983 ~ 25745859 (+)
G113409 NA non-coding downstream 167986 25892657 ~ 25894634 (+)
G113467 NA non-coding downstream 270973 25995644 ~ 25995909 (+)
G113469 NA non-coding downstream 271376 25996047 ~ 25996264 (+)
G113534 NA non-coding downstream 830016 26554687 ~ 26554909 (+)
G113369 LOC108442871 other upstream 104436 25618067 ~ 25618445 (+)
AMCG00006893 ndufa9,LOC107572617,LOC107686627,LOC107732787 other upstream 1135762 24509003 ~ 24587119 (+)
AMCG00006884 ccnd2a,ccnd2,LOC106573197,LOC106561356,LOC107575166,LOC107686624,LOC107732799 other upstream 1386965 24304696 ~ 24335916 (+)
AMCG00006878 ndufb2,LOC102790702 other upstream 1686769 24032089 ~ 24036112 (+)
AMCG00006865 hipk2 other upstream 2168140 23509149 ~ 23554741 (+)
G113400 NA other downstream 90384 25815055 ~ 25832942 (+)

Expression


Co-expression Network