Gene
RNA
| Item | Value |
|---|---|
| gene id | G113479 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030134.1 |
| NCBI id | CM030134.1 |
| chromosome length | 29342575 |
| location | 26001446 ~ 26038323 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU142110 | True | 614 | lncRNA | 0.52 | 3 | 26001446 | 26038323 |
| TU142114 | False | 315 | lncRNA | 0.43 | 2 | 26001446 | 26010499 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006922 | NA | coding | downstream | 8341 | 25976490 ~ 25993105 (-) |
| AMCG00006918 | NA | coding | downstream | 52319 | 25937707 ~ 25949127 (-) |
| AMCG00006919 | NA | coding | downstream | 89864 | 25899551 ~ 25911582 (-) |
| AMCG00006920 | NA | coding | downstream | 108366 | 25888257 ~ 25893080 (-) |
| AMCG00006915 | atp6v1e1,LOC107085735,LOC100708725,LOC102197685,LOC102784574,LOC101477634,LOC106514808,LOC106914460 | coding | downstream | 153961 | 25838755 ~ 25847485 (-) |
| AMCG00006923 | NA | coding | upstream | 54574 | 26092897 ~ 26105386 (-) |
| AMCG00006925 | NA | coding | upstream | 95848 | 26134171 ~ 26140819 (-) |
| AMCG00006924 | NA | coding | upstream | 145928 | 26184251 ~ 26185762 (-) |
| AMCG00006926 | NA | coding | upstream | 154066 | 26192389 ~ 26361451 (-) |
| AMCG00006929 | mtpn,LOC106576424 | coding | upstream | 570220 | 26608543 ~ 26639948 (-) |
| G113468 | NA | non-coding | downstream | 5517 | 25995641 ~ 25995929 (-) |
| G113431 | NA | non-coding | downstream | 134167 | 25866385 ~ 25867279 (-) |
| G113395 | NA | non-coding | downstream | 255461 | 25741068 ~ 25745985 (-) |
| G113393 | NA | non-coding | downstream | 262579 | 25738554 ~ 25738867 (-) |
| G113391 | NA | non-coding | downstream | 281871 | 25719362 ~ 25719575 (-) |
| G113573 | NA | non-coding | upstream | 1021046 | 27059369 ~ 27059594 (-) |
| G113586 | NA | non-coding | upstream | 1117212 | 27155535 ~ 27155857 (-) |
| G113587 | NA | non-coding | upstream | 1126856 | 27165179 ~ 27165398 (-) |
| G113631 | LOC100846954 | non-coding | upstream | 1232136 | 27270459 ~ 27363030 (-) |
| G113667 | NA | non-coding | upstream | 1761615 | 27799938 ~ 27800294 (-) |
| AMCG00006866 | NA | other | downstream | 2430313 | 23568155 ~ 23571133 (-) |
| G113050 | NA | other | downstream | 2594239 | 23404175 ~ 23407207 (-) |
| AMCG00006854 | NA | other | downstream | 3043140 | 22953176 ~ 22958306 (-) |
| AMCG00006841 | NA | other | downstream | 3803782 | 22130495 ~ 22197664 (-) |
| AMCG00006813 | NA | other | downstream | 5036884 | 20854057 ~ 20964562 (-) |
| G113530 | NA | other | upstream | 461692 | 26500015 ~ 26500681 (-) |
| G113645 | ptn,LOC106609498 | other | upstream | 1364277 | 27402600 ~ 27527348 (-) |
| G113775 | LOC100846954 | other | upstream | 2228939 | 28267262 ~ 28292598 (-) |
| G113833 | NA | other | upstream | 2672896 | 28711219 ~ 28812548 (-) |
