G113530


Basic Information

Item Value
gene id G113530
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 26500015 ~ 26500681 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU142176
GGGACAGAACAGGTCTGCGGTAACTAGTGGAAACCCCCATAGCGCACTATGGCTACACCTGCTAAGAAGACACCCCCTAGCGACCACGCTGCTGATGAAGATGCGGGGGCAACTAACACAAAATTAAGACGGATGGAAGACATGGACCCAAAagagACATGTGTAGGAATACCTCCCCTGAGCCCTGGTGAAGCTGCCCAGAtgtctgatgaagatgaaggcGTTAGCACTGTTGATGAAGATGCAGGTGTGTCTAACACAAAATCAAGACGGACGGAAGACAGGGACCCAAAagagAGTGGTGTCAGCCCTCCTCCACCGAGCCCCAGGGACGCTCTCCCAATGTCTGA

Function

GO:

id name namespace
GO:0072329 monocarboxylic acid catabolic process biological_process
GO:0017001 antibiotic catabolic process biological_process
GO:0019541 propionate metabolic process biological_process
GO:0019543 propionate catabolic process biological_process
GO:0009062 fatty acid catabolic process biological_process
GO:0019626 short-chain fatty acid catabolic process biological_process
GO:0046459 short-chain fatty acid metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142176 True 350 TUCP 0.53 3 26500015 26500681

Neighbor

gene id symbol gene type direction distance location
AMCG00006926 NA coding downstream 138564 26192389 ~ 26361451 (-)
AMCG00006924 NA coding downstream 314253 26184251 ~ 26185762 (-)
AMCG00006925 NA coding downstream 359196 26134171 ~ 26140819 (-)
AMCG00006923 NA coding downstream 394629 26092897 ~ 26105386 (-)
AMCG00006922 NA coding downstream 506910 25976490 ~ 25993105 (-)
AMCG00006929 mtpn,LOC106576424 coding upstream 107862 26608543 ~ 26639948 (-)
AMCG00006932 NA coding upstream 808211 27308892 ~ 27309170 (-)
AMCG00006935 NA coding upstream 1136539 27637220 ~ 27649919 (-)
AMCG00006934 NA coding upstream 1168105 27668786 ~ 27677200 (-)
AMCG00006938 NA coding upstream 1304802 27805483 ~ 27824074 (-)
G113479 NA non-coding downstream 461692 26001446 ~ 26038323 (-)
G113468 NA non-coding downstream 504086 25995641 ~ 25995929 (-)
G113431 NA non-coding downstream 632736 25866385 ~ 25867279 (-)
G113395 NA non-coding downstream 754030 25741068 ~ 25745985 (-)
G113393 NA non-coding downstream 761148 25738554 ~ 25738867 (-)
G113573 NA non-coding upstream 558688 27059369 ~ 27059594 (-)
G113586 NA non-coding upstream 654854 27155535 ~ 27155857 (-)
G113587 NA non-coding upstream 664498 27165179 ~ 27165398 (-)
G113631 LOC100846954 non-coding upstream 769778 27270459 ~ 27363030 (-)
G113667 NA non-coding upstream 1299257 27799938 ~ 27800294 (-)
AMCG00006866 NA other downstream 2928882 23568155 ~ 23571133 (-)
G113050 NA other downstream 3092808 23404175 ~ 23407207 (-)
AMCG00006854 NA other downstream 3541709 22953176 ~ 22958306 (-)
AMCG00006841 NA other downstream 4302351 22130495 ~ 22197664 (-)
AMCG00006813 NA other downstream 5535453 20854057 ~ 20964562 (-)
G113645 ptn,LOC106609498 other upstream 901919 27402600 ~ 27527348 (-)
G113775 LOC100846954 other upstream 1766581 28267262 ~ 28292598 (-)
G113833 NA other upstream 2210538 28711219 ~ 28812548 (-)

Expression


Co-expression Network