G113534


Basic Information

Item Value
gene id G113534
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 26554687 ~ 26554909 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU142180
ctgacagttattttgtgtttcttccatttgcgaataatcgcaccaactgttgtcaccttctcaccaagctgcttggcgatggtcttgtagcccattccagccttgtgtaggtctacaatcttgtccctgacatccttggacagctctttggtcttggccatggtggagagtttggaatctgattgattgatagcttctgtggacaggtgtcttttatacaggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142180 True 223 lncRNA 0.46 1 26554687 26554909

Neighbor

gene id symbol gene type direction distance location
AMCG00006928 NA coding upstream 294435 26234852 ~ 26260252 (+)
AMCG00006927 NA coding upstream 350946 26196317 ~ 26203741 (+)
AMCG00006921 nup205 coding upstream 582575 25949686 ~ 25972112 (+)
AMCG00006917 LOC107596953 coding upstream 617117 25912355 ~ 25937570 (+)
AMCG00006911 NA coding upstream 692822 25851405 ~ 25861865 (+)
AMCG00006930 NA coding downstream 149871 26704780 ~ 26706164 (+)
AMCG00006931 NA coding downstream 215617 26770526 ~ 26770852 (+)
AMCG00006933 NA coding downstream 769324 27324233 ~ 27325720 (+)
AMCG00006936 NA coding downstream 1061226 27616135 ~ 27627333 (+)
AMCG00006937 NA coding downstream 1256276 27811185 ~ 27831056 (+)
G113469 NA non-coding upstream 558423 25996047 ~ 25996264 (+)
G113467 NA non-coding upstream 558778 25995644 ~ 25995909 (+)
G113409 NA non-coding upstream 660053 25892657 ~ 25894634 (+)
G113394 NA non-coding upstream 808828 25740983 ~ 25745859 (+)
G113383 NA non-coding upstream 830016 25722881 ~ 25724671 (+)
G113537 mtpn,LOC106576424 non-coding downstream 52750 26607659 ~ 26640179 (+)
G113541 NA non-coding downstream 89847 26644756 ~ 26645011 (+)
G113543 NA non-coding downstream 95842 26650751 ~ 26651028 (+)
G113546 NA non-coding downstream 150327 26705236 ~ 26705468 (+)
G113551 NA non-coding downstream 257824 26812733 ~ 26813221 (+)
G113400 NA other upstream 721745 25815055 ~ 25832942 (+)
G113369 LOC108442871 other upstream 936242 25618067 ~ 25618445 (+)
AMCG00006893 ndufa9,LOC107572617,LOC107686627,LOC107732787 other upstream 1967568 24509003 ~ 24587119 (+)
AMCG00006884 ccnd2a,ccnd2,LOC106573197,LOC106561356,LOC107575166,LOC107686624,LOC107732799 other upstream 2218771 24304696 ~ 24335916 (+)
AMCG00006878 ndufb2,LOC102790702 other upstream 2518575 24032089 ~ 24036112 (+)

Expression


Co-expression Network