G113541


Basic Information

Item Value
gene id G113541
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 26644756 ~ 26645011 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU142196
acactgggggctgaaaccgaaatccaatctcaaaaactcaagaatcaatcacctattgatctgacagactataaagaacagcgcacagcctctttctctctctctctcacctgaaccagaaactcgctgccacagctcaacctgtagctctgttgcccgaaccggaaccagaaaccaaccaagtctttgccggcaacagaagagttaaactgggagaaggagattgagctgtacgaagaattctttcaaaggactt

Function

GO:

id name namespace
GO:1901605 alpha-amino acid metabolic process biological_process
GO:1901607 alpha-amino acid biosynthetic process biological_process
GO:0008652 cellular amino acid biosynthetic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142196 True 256 lncRNA 0.46 1 26644756 26645011

Neighbor

gene id symbol gene type direction distance location
AMCG00006928 NA coding upstream 384504 26234852 ~ 26260252 (+)
AMCG00006927 NA coding upstream 441015 26196317 ~ 26203741 (+)
AMCG00006921 nup205 coding upstream 672644 25949686 ~ 25972112 (+)
AMCG00006917 LOC107596953 coding upstream 707186 25912355 ~ 25937570 (+)
AMCG00006911 NA coding upstream 782891 25851405 ~ 25861865 (+)
AMCG00006930 NA coding downstream 59769 26704780 ~ 26706164 (+)
AMCG00006931 NA coding downstream 125515 26770526 ~ 26770852 (+)
AMCG00006933 NA coding downstream 679222 27324233 ~ 27325720 (+)
AMCG00006936 NA coding downstream 971124 27616135 ~ 27627333 (+)
AMCG00006937 NA coding downstream 1166174 27811185 ~ 27831056 (+)
G113537 mtpn,LOC106576424 non-coding upstream 4577 26607659 ~ 26640179 (+)
G113534 NA non-coding upstream 89847 26554687 ~ 26554909 (+)
G113469 NA non-coding upstream 648492 25996047 ~ 25996264 (+)
G113467 NA non-coding upstream 648847 25995644 ~ 25995909 (+)
G113409 NA non-coding upstream 750122 25892657 ~ 25894634 (+)
G113543 NA non-coding downstream 5740 26650751 ~ 26651028 (+)
G113546 NA non-coding downstream 60225 26705236 ~ 26705468 (+)
G113551 NA non-coding downstream 167722 26812733 ~ 26813221 (+)
G113556 NA non-coding downstream 319337 26964348 ~ 26965795 (+)
G113557 NA non-coding downstream 321782 26966793 ~ 26967236 (+)
G113400 NA other upstream 811814 25815055 ~ 25832942 (+)
G113369 LOC108442871 other upstream 1026311 25618067 ~ 25618445 (+)
AMCG00006893 ndufa9,LOC107572617,LOC107686627,LOC107732787 other upstream 2057637 24509003 ~ 24587119 (+)
AMCG00006884 ccnd2a,ccnd2,LOC106573197,LOC106561356,LOC107575166,LOC107686624,LOC107732799 other upstream 2308840 24304696 ~ 24335916 (+)
AMCG00006878 ndufb2,LOC102790702 other upstream 2608644 24032089 ~ 24036112 (+)

Expression


Co-expression Network