G113543


Basic Information

Item Value
gene id G113543
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 26650751 ~ 26651028 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU142198
gtactgaccactgcagaccgggaacaccccacaagagctgcagttttggagatgctctgacccagtcctctagccatcacaatttggcccttgtcaaaatcgctcagatccttacgcttgcccatttttcctgcttctaacacatcaactttgaggacaaaatgttcacttgctgcctaatatatcccacccactgacaggtgccatgataatgagattatcagtgttattcacttcacctgtcagtggtcataatgttatggctgatcggtgtataa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142198 True 278 lncRNA 0.46 1 26650751 26651028

Neighbor

gene id symbol gene type direction distance location
AMCG00006928 NA coding upstream 390499 26234852 ~ 26260252 (+)
AMCG00006927 NA coding upstream 447010 26196317 ~ 26203741 (+)
AMCG00006921 nup205 coding upstream 678639 25949686 ~ 25972112 (+)
AMCG00006917 LOC107596953 coding upstream 713181 25912355 ~ 25937570 (+)
AMCG00006911 NA coding upstream 788886 25851405 ~ 25861865 (+)
AMCG00006930 NA coding downstream 53752 26704780 ~ 26706164 (+)
AMCG00006931 NA coding downstream 119498 26770526 ~ 26770852 (+)
AMCG00006933 NA coding downstream 673205 27324233 ~ 27325720 (+)
AMCG00006936 NA coding downstream 965107 27616135 ~ 27627333 (+)
AMCG00006937 NA coding downstream 1160157 27811185 ~ 27831056 (+)
G113541 NA non-coding upstream 5740 26644756 ~ 26645011 (+)
G113537 mtpn,LOC106576424 non-coding upstream 10572 26607659 ~ 26640179 (+)
G113534 NA non-coding upstream 95842 26554687 ~ 26554909 (+)
G113469 NA non-coding upstream 654487 25996047 ~ 25996264 (+)
G113467 NA non-coding upstream 654842 25995644 ~ 25995909 (+)
G113546 NA non-coding downstream 54208 26705236 ~ 26705468 (+)
G113551 NA non-coding downstream 161705 26812733 ~ 26813221 (+)
G113556 NA non-coding downstream 313320 26964348 ~ 26965795 (+)
G113557 NA non-coding downstream 315765 26966793 ~ 26967236 (+)
G113564 NA non-coding downstream 326881 26977909 ~ 26978110 (+)
G113400 NA other upstream 817809 25815055 ~ 25832942 (+)
G113369 LOC108442871 other upstream 1032306 25618067 ~ 25618445 (+)
AMCG00006893 ndufa9,LOC107572617,LOC107686627,LOC107732787 other upstream 2063632 24509003 ~ 24587119 (+)
AMCG00006884 ccnd2a,ccnd2,LOC106573197,LOC106561356,LOC107575166,LOC107686624,LOC107732799 other upstream 2314835 24304696 ~ 24335916 (+)
AMCG00006878 ndufb2,LOC102790702 other upstream 2614639 24032089 ~ 24036112 (+)

Expression


Co-expression Network