G113574


Basic Information

Item Value
gene id G113574
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 27062512 ~ 27062845 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU142234
ccctatcaatcagcaagatttctggctcccaggtgtcttttatacaggtaacaagctgagattaggagcactctcttaaagggagtgctcctaatatcagctcgttacctgtataaaagacacctgtccacagaagcaatcaatcaatcagattccaaactctccaccatggccaagaccaaagagctgtccaaggatgtcagggacaagactgTAGACCTACataaggctggaatgggctacaagaccattgccaagcagcttggtgagaaggtgacaacagttggtgagattattcgcaaatggaagaaacacaaaataactgtcagtctcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142234 True 334 lncRNA 0.45 1 27062512 27062845

Neighbor

gene id symbol gene type direction distance location
AMCG00006931 NA coding upstream 291660 26770526 ~ 26770852 (+)
AMCG00006930 NA coding upstream 356348 26704780 ~ 26706164 (+)
AMCG00006928 NA coding upstream 802260 26234852 ~ 26260252 (+)
AMCG00006927 NA coding upstream 858771 26196317 ~ 26203741 (+)
AMCG00006921 nup205 coding upstream 1090400 25949686 ~ 25972112 (+)
AMCG00006933 NA coding downstream 261388 27324233 ~ 27325720 (+)
AMCG00006936 NA coding downstream 553290 27616135 ~ 27627333 (+)
AMCG00006937 NA coding downstream 748340 27811185 ~ 27831056 (+)
AMCG00006950 NA coding downstream 846361 27909206 ~ 27910398 (+)
AMCG00006942 NA coding downstream 851455 27914300 ~ 27935789 (+)
G113572 NA non-coding upstream 2918 27059370 ~ 27059594 (+)
G113564 NA non-coding upstream 84402 26977909 ~ 26978110 (+)
G113557 NA non-coding upstream 95276 26966793 ~ 26967236 (+)
G113556 NA non-coding upstream 96717 26964348 ~ 26965795 (+)
G113551 NA non-coding upstream 249291 26812733 ~ 26813221 (+)
G113585 NA non-coding downstream 92690 27155535 ~ 27155862 (+)
G113592 NA non-coding downstream 197765 27260610 ~ 27261072 (+)
G113594 NA non-coding downstream 199386 27262231 ~ 27283320 (+)
G113596 LOC100846954,LOC107575789 non-coding downstream 206126 27268971 ~ 27363044 (+)
G113607 LOC103376870 non-coding downstream 318078 27380923 ~ 27401968 (+)
G113400 NA other upstream 1229570 25815055 ~ 25832942 (+)
G113369 LOC108442871 other upstream 1444067 25618067 ~ 25618445 (+)
AMCG00006893 ndufa9,LOC107572617,LOC107686627,LOC107732787 other upstream 2475393 24509003 ~ 24587119 (+)
AMCG00006884 ccnd2a,ccnd2,LOC106573197,LOC106561356,LOC107575166,LOC107686624,LOC107732799 other upstream 2726596 24304696 ~ 24335916 (+)
AMCG00006878 ndufb2,LOC102790702 other upstream 3026400 24032089 ~ 24036112 (+)

Expression


Co-expression Network