G113585


Basic Information

Item Value
gene id G113585
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 27155535 ~ 27155862 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU142245
GTGTCAACTGAAACTCTTGAGTGTGTTATGAATGTTATGACTTATGAGATCGAACACATTtcatgtctgcctagcaactagatctgtaatatgtttgtaatatctGTATGTACCTGCCCCGGAACTCTTGGCAATCAGAtttctgacatgtataaaagtgtgtgttgttgcaaaaataaactgaagacaaacgatctggcattgtgtcggtgactttACTTCCTGGGCTCGTAATGCACTGAAGGGTTCCTACTGTTGCTGTGATAAACTTGGGAAGCGATCCACATGTACCTGAAGGGTTTTGACTGGCAGTCAAGTTGTACCTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142245 True 328 lncRNA 0.41 1 27155535 27155862

Neighbor

gene id symbol gene type direction distance location
AMCG00006931 NA coding upstream 384683 26770526 ~ 26770852 (+)
AMCG00006930 NA coding upstream 449371 26704780 ~ 26706164 (+)
AMCG00006928 NA coding upstream 895283 26234852 ~ 26260252 (+)
AMCG00006927 NA coding upstream 951794 26196317 ~ 26203741 (+)
AMCG00006921 nup205 coding upstream 1183423 25949686 ~ 25972112 (+)
AMCG00006933 NA coding downstream 168371 27324233 ~ 27325720 (+)
AMCG00006936 NA coding downstream 460273 27616135 ~ 27627333 (+)
AMCG00006937 NA coding downstream 655323 27811185 ~ 27831056 (+)
AMCG00006950 NA coding downstream 753344 27909206 ~ 27910398 (+)
AMCG00006942 NA coding downstream 758438 27914300 ~ 27935789 (+)
G113574 NA non-coding upstream 92690 27062512 ~ 27062845 (+)
G113572 NA non-coding upstream 95941 27059370 ~ 27059594 (+)
G113564 NA non-coding upstream 177425 26977909 ~ 26978110 (+)
G113557 NA non-coding upstream 188299 26966793 ~ 26967236 (+)
G113556 NA non-coding upstream 189740 26964348 ~ 26965795 (+)
G113592 NA non-coding downstream 104748 27260610 ~ 27261072 (+)
G113594 NA non-coding downstream 106369 27262231 ~ 27283320 (+)
G113596 LOC100846954,LOC107575789 non-coding downstream 113109 27268971 ~ 27363044 (+)
G113607 LOC103376870 non-coding downstream 225061 27380923 ~ 27401968 (+)
G113680 NA non-coding downstream 700252 27856114 ~ 27856462 (+)
G113400 NA other upstream 1322593 25815055 ~ 25832942 (+)
G113369 LOC108442871 other upstream 1537090 25618067 ~ 25618445 (+)
AMCG00006893 ndufa9,LOC107572617,LOC107686627,LOC107732787 other upstream 2568416 24509003 ~ 24587119 (+)
AMCG00006884 ccnd2a,ccnd2,LOC106573197,LOC106561356,LOC107575166,LOC107686624,LOC107732799 other upstream 2819619 24304696 ~ 24335916 (+)
AMCG00006878 ndufb2,LOC102790702 other upstream 3119423 24032089 ~ 24036112 (+)

Expression


Co-expression Network