G113607 (LOC103376870)


Basic Information

Item Value
gene id G113607
gene name LOC103376870
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 27380923 ~ 27401968 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU142272
AAAGTATGTGTGGAAGAGAGGAGGCAGGATCAGAAACATACAATAGGAGATCATTAGCATATAACGAGTACACTCCTCCCTAACCACCCCCTGTATCCCACAGTTACTGCGTAGTGCAATAGAGAGAGGTTCGATTGCAATAGCAAGTGGAGAAaaaagtggagagagagggcatcCCTGTCTGGTTCCACGGGGGAGGGGGAAGTATTCTTATTGAATGTTGTTGGTGCGTACTGAGGCAAGAGGAGATACGTACAATAATTGTATCGAGTTATTAATATTGGGACCAAAACCAAATTTCTGTAAAGTTATAAAAATCCCATCATTCAGTCGGTCCATTCTCCTCTGatctctagcatcaacaaggcattttcgcccacaggactgccgcatactggatgtttttcccttttcacaccattctttgtaaaccctagaaatggttgtgcatgaaaatcccagtaactgagcagattgtgaaatactcagaccgggccgtctggcaccaacaaccatgccacgctcaaaattgcttaaatcacctttctttcccattcagacattcagtttggagttcaggagattgtcttgaccaggaccacacccctaaatgcattgaagcaactgccatgtgattggttggttagataattgcattaatgagaaattgaacaggtgttcctaataatcatttaggtgagtgtatatatatatatatatatatatatatatatata

Function

NR:

description
PREDICTED: uncharacterized protein LOC103376870

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142272 True 737 lncRNA 0.41 2 27380923 27401968

Neighbor

gene id symbol gene type direction distance location
AMCG00006933 NA coding upstream 55203 27324233 ~ 27325720 (+)
AMCG00006931 NA coding upstream 610071 26770526 ~ 26770852 (+)
AMCG00006930 NA coding upstream 674759 26704780 ~ 26706164 (+)
AMCG00006928 NA coding upstream 1120671 26234852 ~ 26260252 (+)
AMCG00006927 NA coding upstream 1177182 26196317 ~ 26203741 (+)
AMCG00006936 NA coding downstream 214167 27616135 ~ 27627333 (+)
AMCG00006937 NA coding downstream 409217 27811185 ~ 27831056 (+)
AMCG00006950 NA coding downstream 507238 27909206 ~ 27910398 (+)
AMCG00006942 NA coding downstream 512332 27914300 ~ 27935789 (+)
AMCG00006943 NA coding downstream 703640 28105608 ~ 28128135 (+)
G113596 LOC100846954,LOC107575789 non-coding upstream 17879 27268971 ~ 27363044 (+)
G113594 NA non-coding upstream 97603 27262231 ~ 27283320 (+)
G113592 NA non-coding upstream 119851 27260610 ~ 27261072 (+)
G113585 NA non-coding upstream 225061 27155535 ~ 27155862 (+)
G113574 NA non-coding upstream 318078 27062512 ~ 27062845 (+)
G113680 NA non-coding downstream 454146 27856114 ~ 27856462 (+)
G113711 NA non-coding downstream 657156 28059124 ~ 28060590 (+)
G113717 LOC107575789 non-coding downstream 675985 28077953 ~ 28078459 (+)
G113741 NA non-coding downstream 736383 28138351 ~ 28138938 (+)
G113743 klhl42,LOC106576288,LOC106609448 non-coding downstream 739315 28141283 ~ 28142251 (+)
G113400 NA other upstream 1547981 25815055 ~ 25832942 (+)
G113369 LOC108442871 other upstream 1762478 25618067 ~ 25618445 (+)
AMCG00006893 ndufa9,LOC107572617,LOC107686627,LOC107732787 other upstream 2793804 24509003 ~ 24587119 (+)
AMCG00006884 ccnd2a,ccnd2,LOC106573197,LOC106561356,LOC107575166,LOC107686624,LOC107732799 other upstream 3045007 24304696 ~ 24335916 (+)
AMCG00006878 ndufb2,LOC102790702 other upstream 3344811 24032089 ~ 24036112 (+)

Expression


Co-expression Network