G113680


Basic Information

Item Value
gene id G113680
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 27856114 ~ 27856462 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU142367
gccttcgctccccacgtgcatcaatgagccttggccacccatgaccctgtcgccggttcaccgcttttccttccttggaccacttttgataggtactgaccactgtagactgggaacaccccacaagagctgcagttttggagatgctctgacccagtcgtctagccatgacaatttggcccttgtcaaagtcgctcagatccttgcgcttgcccatttttcctgcttctaacacatcaactttgaggacaaaatgttcacttgctgcctaatatatcccacccactgacaggtgccatgataacgagattatcagtgttatttacttcacctgtcagtggtcataatg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142367 True 349 lncRNA 0.49 1 27856114 27856462

Neighbor

gene id symbol gene type direction distance location
AMCG00006937 NA coding upstream 25058 27811185 ~ 27831056 (+)
AMCG00006936 NA coding upstream 228781 27616135 ~ 27627333 (+)
AMCG00006933 NA coding upstream 530394 27324233 ~ 27325720 (+)
AMCG00006931 NA coding upstream 1085262 26770526 ~ 26770852 (+)
AMCG00006930 NA coding upstream 1149950 26704780 ~ 26706164 (+)
AMCG00006950 NA coding downstream 52744 27909206 ~ 27910398 (+)
AMCG00006942 NA coding downstream 57838 27914300 ~ 27935789 (+)
AMCG00006943 NA coding downstream 249146 28105608 ~ 28128135 (+)
AMCG00006944 cwf19l1 coding downstream 291376 28147838 ~ 28188827 (+)
AMCG00006947 NA coding downstream 436558 28293020 ~ 28331354 (+)
G113607 LOC103376870 non-coding upstream 454146 27380923 ~ 27401968 (+)
G113596 LOC100846954,LOC107575789 non-coding upstream 493070 27268971 ~ 27363044 (+)
G113594 NA non-coding upstream 572794 27262231 ~ 27283320 (+)
G113592 NA non-coding upstream 595042 27260610 ~ 27261072 (+)
G113585 NA non-coding upstream 700252 27155535 ~ 27155862 (+)
G113711 NA non-coding downstream 202662 28059124 ~ 28060590 (+)
G113717 LOC107575789 non-coding downstream 221491 28077953 ~ 28078459 (+)
G113741 NA non-coding downstream 281889 28138351 ~ 28138938 (+)
G113743 klhl42,LOC106576288,LOC106609448 non-coding downstream 284821 28141283 ~ 28142251 (+)
G113747 NA non-coding downstream 344080 28200542 ~ 28204108 (+)
G113400 NA other upstream 2023172 25815055 ~ 25832942 (+)
G113369 LOC108442871 other upstream 2237669 25618067 ~ 25618445 (+)
AMCG00006893 ndufa9,LOC107572617,LOC107686627,LOC107732787 other upstream 3268995 24509003 ~ 24587119 (+)
AMCG00006884 ccnd2a,ccnd2,LOC106573197,LOC106561356,LOC107575166,LOC107686624,LOC107732799 other upstream 3520198 24304696 ~ 24335916 (+)
AMCG00006878 ndufb2,LOC102790702 other upstream 3820002 24032089 ~ 24036112 (+)

Expression


Co-expression Network