G113711


Basic Information

Item Value
gene id G113711
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 28059124 ~ 28060590 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU142401
GTCTGGTTTTaggttgtttattttgcttctccacaggctttcatttcagagcttatttacaaaaaaaaataatcgtaagaaaaatacaaagcatagaATTTTCTGAGAAGCATACATGGAACACTACAGAGACACTTTACGCCAAGTTACTTGTCTATTGGgtgcaaatattaatttacattcacCTGGGTTGAAGAAAGTAATGCGAGAGAAACTGTCATGTAACTCAGCAAGCGACAGACACTCTGTAATATGGTGCAAACATTGCCTCCCACATCTGTCTAAACATCTGGAAAAGGTCAGAGATCCAAGGAAAAGCTGAGGGAATggctggaaaataaacaaagtggaacagttatttattgatttaaattgtttagtATAAGCAAGTCCTAAATGCATTCCATATTAAATTGTTCTTCAAACATTGTactttatgtattatgtatttacctatttttaaaaagaatatgCAGTAAAGGGATTACACATTTGCACATCTGGAGCACaccatataaatgtatttatagaaatatacataatattacaTAATGTTAAGGTGGGGCATTTCTTGGACAACTAACGCTACAACCTTTGCCGAATTTTTTTCCCCGAAACATCTCAGAAATCTAATGTTCATGTAAATATtctaatttacttaattgaagaaaacaattaaaattggACTAAGAGATTTAGCAAAAGTAAATCCTCAgtaaaaaagtataatataaaaGATTGGTATGTAACTTTCTCTATAAcaatattttcactttatttgtgTGCTTTATTCCATCATTTTATcatgttctgtatatttattgCTGAATTTAATTCAATTGCTTATTTGAGTTCAATCAAATCAACAgggtttaattaaacaataagttATACTAGAGACTACAATAGATCAGACTTTGTCAAAACCTGGGATGTAAGTGTTGCAAGATGTTTGCCTTTGCCTTTAAGCATTTCCTCTCTATCCCCGTCTGTTCtcccttaataataataataataaaacagtaatttaactTGTTTGGATAAAatccatatatacatttagCTCTCACTAATGTCAGACTATGAAcatacagctctagaaaaaagtcagttttgGGATCGTAGGACATTAAGAGACGCATATTGCATATTGCTGTTGAATACGCAAAATGGTGATGAACCAACGCTGATGATGAAATCTGTGTGATAAATAGTtgctggtgatgaaaagtgtgtgacaAAAAGACATGCTCCCGAGCACAATAATATAGCAATATCAGTTAGGTGGTCACACATGTATAtttcatgtacagtgagggaaaaaagtatttgatcccctgctgattttgta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142401 True 1351 lncRNA 0.32 3 28059124 28060590

Neighbor

gene id symbol gene type direction distance location
AMCG00006942 NA coding upstream 123335 27914300 ~ 27935789 (+)
AMCG00006950 NA coding upstream 148726 27909206 ~ 27910398 (+)
AMCG00006937 NA coding upstream 228068 27811185 ~ 27831056 (+)
AMCG00006936 NA coding upstream 431791 27616135 ~ 27627333 (+)
AMCG00006933 NA coding upstream 733404 27324233 ~ 27325720 (+)
AMCG00006943 NA coding downstream 45018 28105608 ~ 28128135 (+)
AMCG00006944 cwf19l1 coding downstream 87248 28147838 ~ 28188827 (+)
AMCG00006947 NA coding downstream 232430 28293020 ~ 28331354 (+)
AMCG00006945 NA coding downstream 271878 28332468 ~ 28364610 (+)
AMCG00006946 NA coding downstream 307534 28368124 ~ 28401071 (+)
G113680 NA non-coding upstream 202662 27856114 ~ 27856462 (+)
G113607 LOC103376870 non-coding upstream 657156 27380923 ~ 27401968 (+)
G113596 LOC100846954,LOC107575789 non-coding upstream 696080 27268971 ~ 27363044 (+)
G113594 NA non-coding upstream 775804 27262231 ~ 27283320 (+)
G113592 NA non-coding upstream 798052 27260610 ~ 27261072 (+)
G113717 LOC107575789 non-coding downstream 17363 28077953 ~ 28078459 (+)
G113741 NA non-coding downstream 77761 28138351 ~ 28138938 (+)
G113743 klhl42,LOC106576288,LOC106609448 non-coding downstream 80693 28141283 ~ 28142251 (+)
G113747 NA non-coding downstream 139952 28200542 ~ 28204108 (+)
G113760 NA non-coding downstream 155410 28216000 ~ 28216235 (+)
G113400 NA other upstream 2226182 25815055 ~ 25832942 (+)
G113369 LOC108442871 other upstream 2440679 25618067 ~ 25618445 (+)
AMCG00006893 ndufa9,LOC107572617,LOC107686627,LOC107732787 other upstream 3472005 24509003 ~ 24587119 (+)
AMCG00006884 ccnd2a,ccnd2,LOC106573197,LOC106561356,LOC107575166,LOC107686624,LOC107732799 other upstream 3723208 24304696 ~ 24335916 (+)
AMCG00006878 ndufb2,LOC102790702 other upstream 4023012 24032089 ~ 24036112 (+)

Expression


Co-expression Network