G113824


Basic Information

Item Value
gene id G113824
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 28647265 ~ 28647523 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU142540
tcgcagggtagccacagagcgctttacagactggtaaacatacaacaaacgtatagcaaaataaaaaacataaatacaataaaatcaaatatagacctgtaaacattttacatgatctagaataaagtgagtgaacatttaagtaaataaaccatttaggcacggaggagagaaaaacaaaaaactcctatggatggcatgtaggagaaaatgaatctctgggggtccacggcttagggcctaggcctaatggttgcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142540 True 259 lncRNA 0.38 1 28647265 28647523

Neighbor

gene id symbol gene type direction distance location
AMCG00006953 NA coding upstream 20852 28626138 ~ 28626413 (+)
AMCG00006952 ano2,LOC104963823,LOC103369069 coding upstream 96805 28546321 ~ 28550460 (+)
AMCG00006951 LOC105898343,LOC106910078,LOC106946326,LOC103151522,LOC107087059 coding upstream 153254 28493435 ~ 28494011 (+)
AMCG00006946 NA coding upstream 246194 28368124 ~ 28401071 (+)
AMCG00006945 NA coding upstream 282655 28332468 ~ 28364610 (+)
AMCG00006954 rad52,LOC107753587 coding downstream 202260 28849783 ~ 28855154 (+)
AMCG00006961 ninj2 coding downstream 470054 29117577 ~ 29121806 (+)
AMCG00006963 prr5,LOC100286559,LOC101171242 coding downstream 527379 29174902 ~ 29177235 (+)
AMCG00006962 NA coding downstream 562670 29210193 ~ 29214986 (+)
AMCG00006966 NA coding downstream 586123 29233646 ~ 29235193 (+)
G113805 LOC100846954 non-coding upstream 27453 28619006 ~ 28619812 (+)
G113760 NA non-coding upstream 431030 28216000 ~ 28216235 (+)
G113747 NA non-coding upstream 443157 28200542 ~ 28204108 (+)
G113743 klhl42,LOC106576288,LOC106609448 non-coding upstream 505014 28141283 ~ 28142251 (+)
G113741 NA non-coding upstream 508327 28138351 ~ 28138938 (+)
G113836 NA non-coding downstream 182136 28829659 ~ 28830065 (+)
G113846 NA non-coding downstream 221203 28868726 ~ 28868988 (+)
G113847 NA non-coding downstream 221536 28869059 ~ 28869326 (+)
G113894 NA non-coding downstream 423296 29070819 ~ 29071183 (+)
G113925 NA non-coding downstream 589680 29237203 ~ 29240687 (+)
G113400 NA other upstream 2814323 25815055 ~ 25832942 (+)
G113369 LOC108442871 other upstream 3028820 25618067 ~ 25618445 (+)
AMCG00006893 ndufa9,LOC107572617,LOC107686627,LOC107732787 other upstream 4060146 24509003 ~ 24587119 (+)
AMCG00006884 ccnd2a,ccnd2,LOC106573197,LOC106561356,LOC107575166,LOC107686624,LOC107732799 other upstream 4311349 24304696 ~ 24335916 (+)
AMCG00006878 ndufb2,LOC102790702 other upstream 4611153 24032089 ~ 24036112 (+)

Expression


Co-expression Network