AMCG00006978


Basic Information

Item Value
gene id AMCG00006978
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 140536 ~ 143181 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006978
ATTTACATttgatatagatatacagatatCCACACTGTACAAATGTACCCGCATCCATGCCTCTACACAGTCCTACACGTATAAATGCACACTTGGAGAAAATGATACTCCCATAGTGCTTGGCTATAGCCGTCACCAGATATCAGTGTAGCACGAATCAGTCCGGACCGAGGGGCAGTCTGTGCTCACACAGCTGTGTGGCTCAATACCGCGGGACAGACCGACCATTGTGCCGTAGTGTGCTGTAACTGTCAGGGATCGTGTGTTAAATTGCTGCTGGGTGTCAGTCAGTGATTGTTTAATTGTGTCGGTGATAGTGTTTAATTGCAGCggtgtcagtcagATGCGTTACGTAGCTGCCTACCTGCTGGCCGCTCTGGGCGGAACCGACAGCCCCAACTCTAAAGACCTGAAGAAGATCTTGGACAGCGTTGGCATTGAGGTGGACGACACACGCATGGACAAGgctatGGGAAGCTGGCCAGTGTTCCTGCAGGGGGCGCTGTGGCCGTGTGCAGCTCTGCTACCGCCGGAGGAGCTGCTGCCCCCGCTGCCGAAGTGCATGCTGGGATACTGCGCCACAAAGCCCGTGGACCTGTAA

Function

GO:

id name namespace
GO:0006414 translational elongation biological_process
GO:0009790 embryo development biological_process
GO:0005840 ribosome cellular_component
GO:0003735 structural constituent of ribosome molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006978 True 601 mRNA 0.53 4 140536 143181

Neighbor

gene id symbol gene type direction distance location
AMCG00006981 NA coding downstream 2803 127488 ~ 137733 (-)
AMCG00006977 NA coding downstream 15373 113177 ~ 125163 (-)
AMCG00006979 NA coding downstream 45244 78452 ~ 95292 (-)
AMCG00006980 NA coding downstream 62124 66755 ~ 78412 (-)
AMCG00006982 NA coding downstream 83108 55592 ~ 57428 (-)
AMCG00006988 NA coding upstream 52123 195304 ~ 198829 (-)
AMCG00006987 ddb1 coding upstream 82914 226095 ~ 241460 (-)
AMCG00006995 NA coding upstream 174435 317616 ~ 328711 (-)
AMCG00006996 NA coding upstream 222809 365990 ~ 379890 (-)
AMCG00007002 NA coding upstream 321388 464569 ~ 472311 (-)
G20353 NA non-coding upstream 24753 167934 ~ 182823 (-)
G20355 NA non-coding upstream 40576 183757 ~ 188858 (-)
G20395 NA non-coding upstream 115910 259091 ~ 259480 (-)
G20412 NA non-coding upstream 161408 304589 ~ 306860 (-)
G20424 NA non-coding upstream 164828 308009 ~ 309826 (-)
G20388 ddb1,LOC107681355 other upstream 87143 230324 ~ 232494 (-)
G20397 LOC100846954 other upstream 116402 259583 ~ 260236 (-)
AMCG00006997 NA other upstream 213437 356618 ~ 362294 (-)
AMCG00007001 NA other upstream 265658 408839 ~ 414126 (-)
G20609 NA other upstream 702748 845929 ~ 917829 (-)

Expression


Co-expression Network