AMCG00006981


Basic Information

Item Value
gene id AMCG00006981
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 127488 ~ 137733 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006981
ATGTTCCCTCTGGACTCTCCCTGGAACATCTCCTTTGCCGGCTGCGGGTTCCTGGGGATCTACCACATCGGCGTGGCCAGCTGCCTGCAGGAACAGGCGCCCTTCCTGCTGATGCGTGTGTTGTTGTACCGTACGCTACCCcccaattcacacacacacgccaccGGGCGCCTGGGCATCTCCCTCACACGCGTGTCCGACGGCCAGAACTTTCGGGGACCCCAGCACAGCCTGATCCCccggggagagggggaggagaagcaggaggaagagaaggaaaaggaggaagaggaggaggaaggggaagaAGGGCAGATGGAGAAAGATGGAGGGATGAAGCCAGAGGAGAGGAGGGCGAAGGAGAGCGAGGGAGCAGCCGGAGGAGAGCAGCACATCTTTGAGCACCTGCCCCCCCGACTACACAGAgCCCTAGTGGAGGCGTGTGCGGAGCGGCGCAGTGTGTTCCACCTGCTGCCCGGCTGGGTGGGAGGCAGCGGATCGGTTCTGGACCTGATGATGAAGCTGGACCAGTACCAGCGCCAGCTGCTCCCGGGAGTGCTCTGCATCAACCTTGACCTGCAGGCGTCACTGTACACCCAGCCCTTGACCCCGGAGCAGCCAGAGGAGCCGGAGGAGCTGGGGGGCCTGGAGATGAGGCCCCTGCCTCCCCCCTCTGCACCCCCTGTGCTCCCCTAG

Function

GO:

id name namespace
GO:0006629 lipid metabolic process biological_process
GO:0016787 hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006981 True 696 mRNA 0.64 5 127488 137733

Neighbor

gene id symbol gene type direction distance location
AMCG00006977 NA coding downstream 2325 113177 ~ 125163 (-)
AMCG00006979 NA coding downstream 32196 78452 ~ 95292 (-)
AMCG00006980 NA coding downstream 49076 66755 ~ 78412 (-)
AMCG00006982 NA coding downstream 70060 55592 ~ 57428 (-)
AMCG00006972 LOC108429468 coding downstream 79137 40523 ~ 48351 (-)
AMCG00006978 NA coding upstream 2803 140536 ~ 143181 (-)
AMCG00006988 NA coding upstream 57571 195304 ~ 198829 (-)
AMCG00006987 ddb1 coding upstream 88362 226095 ~ 241460 (-)
AMCG00006995 NA coding upstream 179883 317616 ~ 328711 (-)
AMCG00006996 NA coding upstream 228257 365990 ~ 379890 (-)
G20353 NA non-coding upstream 30201 167934 ~ 182823 (-)
G20355 NA non-coding upstream 46024 183757 ~ 188858 (-)
G20395 NA non-coding upstream 121358 259091 ~ 259480 (-)
G20412 NA non-coding upstream 166856 304589 ~ 306860 (-)
G20424 NA non-coding upstream 170276 308009 ~ 309826 (-)
G20388 ddb1,LOC107681355 other upstream 92591 230324 ~ 232494 (-)
G20397 LOC100846954 other upstream 121850 259583 ~ 260236 (-)
AMCG00006997 NA other upstream 218885 356618 ~ 362294 (-)
AMCG00007001 NA other upstream 271106 408839 ~ 414126 (-)
G20609 NA other upstream 708196 845929 ~ 917829 (-)

Expression


Co-expression Network