AMCG00006988


Basic Information

Item Value
gene id AMCG00006988
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 195304 ~ 198829 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006988
ATGCGGCGCTCCAGCACTGACGAGTCTCCGTACCGCCGCAGCCCTTCCCTAGACAGCAAGCCCGGCTCGCCACCCCCCTGCACCTTCCGCCGCTGCAGCAGCCCCTCCGCCGGCCTGGGCTTTGGCCCGCCCCACGCCCCCCCCGCCGCCCAGGGCAAGTGCAGCTCCCCCAAGGGCAACCGCTACGTActgGGGGGCTGTGGGGTGCTGGGAGTGGGGATCTGGCTGGCTATAGACCACTATGCCCAGGCCGAGCTGCAGAGGGGGCTGCATCTGTTCGGCAGTGAGGGGAACGTGGGGCTGACCAACGCCTGGAGCATCATCCAGACCGATTTCCGGTGCTGTGGCGTGTCCAACCACACAGACTGGTTCCCTGTGTACAACACCACACGCGTGCCCGACTCCTGCTGCCAGGAGCACAGCCTGGACTGTGGCCTGGAGCAGCCCGGGACATGGTGGACTGAGccctGCTATAAGAAGGTGAAGATGTGGCTGCAGGAGAATCTGCTGGGTCTGTGGATCTCTGCTCTGTGTACAGGATTGACACAGgtgctgGCTCTGGCATTCTCGATGGTATTGTTCTGTCAGGTGGTCAAGTCTGACACATTCTACACGTAG

Function

GO: NA

KEGG:

id description
K17294 TSPAN4; tetraspanin-4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006988 True 618 mRNA 0.64 6 195304 198829

Neighbor

gene id symbol gene type direction distance location
AMCG00006978 NA coding downstream 52123 140536 ~ 143181 (-)
AMCG00006981 NA coding downstream 57571 127488 ~ 137733 (-)
AMCG00006977 NA coding downstream 70141 113177 ~ 125163 (-)
AMCG00006979 NA coding downstream 100012 78452 ~ 95292 (-)
AMCG00006980 NA coding downstream 116892 66755 ~ 78412 (-)
AMCG00006987 ddb1 coding upstream 27266 226095 ~ 241460 (-)
AMCG00006995 NA coding upstream 118787 317616 ~ 328711 (-)
AMCG00006996 NA coding upstream 167161 365990 ~ 379890 (-)
AMCG00007002 NA coding upstream 265740 464569 ~ 472311 (-)
AMCG00007003 NA coding upstream 275029 473858 ~ 478272 (-)
G20355 NA non-coding downstream 6446 183757 ~ 188858 (-)
G20353 NA non-coding downstream 12481 167934 ~ 182823 (-)
G20395 NA non-coding upstream 60262 259091 ~ 259480 (-)
G20412 NA non-coding upstream 105760 304589 ~ 306860 (-)
G20424 NA non-coding upstream 109180 308009 ~ 309826 (-)
G20423 NA non-coding upstream 111884 310713 ~ 317114 (-)
G20446 LOC103368535,LOC104922780 non-coding upstream 147445 346274 ~ 353471 (-)
G20388 ddb1,LOC107681355 other upstream 31495 230324 ~ 232494 (-)
G20397 LOC100846954 other upstream 60754 259583 ~ 260236 (-)
AMCG00006997 NA other upstream 157789 356618 ~ 362294 (-)
AMCG00007001 NA other upstream 210010 408839 ~ 414126 (-)
G20609 NA other upstream 647100 845929 ~ 917829 (-)

Expression


Co-expression Network