AMCG00006995


Basic Information

Item Value
gene id AMCG00006995
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 317616 ~ 328711 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006995
ggTGGAATACGGTAGTGCGCCTCTCTCGGGCGGAATACGGCAGTGCGCTCGGCGCGTTTCCATGGGAGACGGAGAGGCGACTCGAGCACCGACCGGACCGGAGCGGAAACCGAGCTGCGCACACCGAGCTGCGCACACCGAGCGGAGCGGAGCGGAGCGGAAACCGAGCTGCGGACACCGAGCTGCGCACACCGAGCGGAGCGGACACCGAGCTGCGGACACCGAGCGGAGCGGACACAGAGCTGCGGACTGGACAGCGAGCGGATACCGAGCGgATCGAAGCCTGGGGTTCATCACAGCGCTGCCTGCCTGAGGAGACACCCCGCCCTCACAACCTCACACACTGATacaccctctccccctctctgtctcacactcacacacactctccgtctcactcacacacacactcttacacacacacactcagtgaCTGAGGCTGTCTGAACCTGCTTCCAGTGAAGAGActccacactcacacacacagtgtcccGCTGCCTCCACTCCCAGAGCGAGATACCTGACCTGGCTCCCATAGTCCTTGGGCCTGGACGGGTTCTGCCCGCCTCTCAGCACCATGGAGCGGACCTCCCCCTGACACACTGCTGGGCCTGACTCCCCACCGCACCGGACCTCACCACATTGGGCTTGACTGGACCTGTTTTCTGGAGTGTGTTTCTGGACTGGAATCCAACTGGGCTGGAGGGAGGTGTGAGCCCGTGCCCTGGCACTGGTCCTGGCAGCAGGTTTGTGGGTTCTGGAGGCGaggcccggcccggcccagcAATGCTGCAGACCAGCAACTACTCGCTGGTACTGCTGGTGCAGCTCAGCCTGCTGGGATACGACCTGTTTGTGAACACCTTCAGCGAGCTGCTCCGAGCTGCGCCCGTCATTCAGCTGGTGCTCTTCgttGTTCAGGACATCGGGATCCTGTTCAATGTGATCATCGTGCTGCTCATGCTGTTCAACACCTTCGTGTTCCAGGTGGGGCTGCTGTCCCTGCTGCTGCAGCGCTGCTACCCCCTGCTGTTGAGCGCAGCGCTCTACCTGCCACTCAGCATCGCCCTCCACTGCTGGATCCTGGTACTGCGCCCGTACGGCCTGCAGgccctgtttgtgtttcagagaCTGGgGGCTGTGCTGTATTATTACCTGTATAAGCGCATGGCGGAGTTCCTGGGCGACCCCCGGCTCTACGAGGACTCCGTCTGGCTGCGTAACGCCTTTGCTCGAGCGCGGcagtgaggagggggagggagtcggcacagaggagagagagggagctgcAAGGGAAACCCTGGAAATTGAGGCAGAACTAATGGCTATGCCCTTGATCTCTGGGGGGGCAGCGTCTTCACGGTCGGGATGGATTGGGGGGCTCTCCTTTAGTGGGATCTGGACCAGCGGGAAAttccagccccccccccaactgCACTGCAACAGGGCGGTTTTGTCCCCGTCCCCGTCTGCATTTGTGTCCCTGTTTCAGGAAGTGTCCGTCAGTTTACGCCAGACACAGATGGACGgtgacacacgcacacgcacgcgcaCGGCGTCTCTATGCGCTCGGATGGGCAGGGCTCCAGTGTGAGACAGAGGCTTGCGGCGGCCTGGAGACTGTGCGGCTAACAGACTCTGCAGGCCCTGAGCCCTGTGCAGCGCCTGCGCACTGAGACTGACCCAGCGGACTGGACCGGACCCGGCCACACCCCAAGAACTCAACTGTGATTGTagtccaatttttttttttttacaattattttacaggGGAACAGTGATTAGAactgtcgggggg

Function

GO: NA

KEGG:

id description
K22867 TMEM138; transmembrane protein 138

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006995 True 1798 mRNA 0.61 6 317616 328711

Neighbor

gene id symbol gene type direction distance location
AMCG00006987 ddb1 coding downstream 76156 226095 ~ 241460 (-)
AMCG00006988 NA coding downstream 118787 195304 ~ 198829 (-)
AMCG00006978 NA coding downstream 174435 140536 ~ 143181 (-)
AMCG00006981 NA coding downstream 179883 127488 ~ 137733 (-)
AMCG00006977 NA coding downstream 192453 113177 ~ 125163 (-)
AMCG00006996 NA coding upstream 37279 365990 ~ 379890 (-)
AMCG00007002 NA coding upstream 135858 464569 ~ 472311 (-)
AMCG00007003 NA coding upstream 145147 473858 ~ 478272 (-)
AMCG00007004 NA coding upstream 159944 488655 ~ 509749 (-)
AMCG00007009 NA coding upstream 224604 553315 ~ 554154 (-)
G20423 NA non-coding downstream 502 310713 ~ 317114 (-)
G20424 NA non-coding downstream 7790 308009 ~ 309826 (-)
G20412 NA non-coding downstream 10756 304589 ~ 306860 (-)
G20395 NA non-coding downstream 58136 259091 ~ 259480 (-)
G20355 NA non-coding downstream 128758 183757 ~ 188858 (-)
G20446 LOC103368535,LOC104922780 non-coding upstream 17563 346274 ~ 353471 (-)
G20465 NA non-coding upstream 94623 423334 ~ 424778 (-)
G20501 NA non-coding upstream 217345 546056 ~ 546501 (-)
G20507 NA non-coding upstream 259614 588325 ~ 588602 (-)
G20510 NA non-coding upstream 266766 595477 ~ 595770 (-)
G20397 LOC100846954 other downstream 57380 259583 ~ 260236 (-)
G20388 ddb1,LOC107681355 other downstream 85122 230324 ~ 232494 (-)
AMCG00006997 NA other upstream 27907 356618 ~ 362294 (-)
AMCG00007001 NA other upstream 80128 408839 ~ 414126 (-)
G20609 NA other upstream 517218 845929 ~ 917829 (-)
G20630 NA other upstream 623525 952236 ~ 953062 (-)
AMCG00007059 NA other upstream 1813964 2142675 ~ 2196855 (-)

Expression


Co-expression Network