AMCG00006996


Basic Information

Item Value
gene id AMCG00006996
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 365990 ~ 379890 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006996
tcAGTTCACGAGCCCTCTACACAGCAATACACTCTTTGCACCCTGTCACAGttcacacactacacacagcgCACACAGTCTGCTTACAGTGTGTATCTGCGGGAGAGGAGTCAGTCCACCACTCAGAATGTCCCGGCACCTGGGGTGGCTCGTTCCGACAGCAAGCTCAGTGCCAAGGCCCTGTATGagCAGAGGAAAAAGTACTCCAACTCCAACATCATCATGCAAGAGACATCACAGTACCATGTGGAGcACCTCTCCACATTCGTGATGGACAAGAGTGAGTCCATCGCCACCGTGGACGACGCTGTGAAGAAGCTCATTCTGCTCGACTCAAAAGACAAGATCTGGACGCAGGAGATGCTGCTGCAGGTCAGCGACTCGGCCATCCGCCTGCTGGACTGCGACTCACAGGCGGAGATGGTGCACGCTGACATAGACAGCGCCCTGGGGGACAGTAAACACGGGAAGAAGATGCGTCCACAGACCCTGAAGGTGAACCAGGAGAAGATGAAGCGACGACGTGAATCCATCCTGCCGCCCAGCCCCGCCCCCAGCCACGCCCGACCCAGGGGGAAAGGTCGTGCCAAACTGAGGAAGCACATCCAGAACCCCAGCGCAGCAGAGCTcatccacttcctgtttggaCCCCTGGagatgGTGCTGCAGAGCTGCGGGGGGCCGGAGGTGGCACAGTCAGTGCTCAGCCCCCTGCTGTGCCGAGAGGCCGTGCAGTTCCTGCGGGGGCACCTGTCCCCCACGGAGACCAGCCTGTACGAGCTGCTGGGGGACGCCTGGACACGCCCTCGGGCTGATTGGCCAAGGGATCAGTATGTCCCGCCCTACCATCCCAAGTTCCGGAATGGCTGGGAGCCGCCGGCAGAGCTGTTCCGGGGCGTTGCCTGGGAAACAGAGGGGTCAGCCCCACTCACCCCCACACCTGAGTACAGGAGGAAGCCTTCAACCGATgagACCTGCGGATGGTCAGGATCCAGCTTTGACTtaAGTTTCGACTCCTCCCTCAGTAAGCCAAAGAAATACGTTAAGATTCGCTATCACTTCGTGGCCAGAAACGCCAATGAGCTGTCAGTGCTGCAGGACGAGGTGctggagGTGCTGGAGGATGACAAGCAGTGGTGGCTGCTGCGTAGCCGCATTGGGCAGGCGGGGTACGTGCCCTACAACATCCTGGACATCGTCAAGCTGGAGGAGCATGGCCTGCCTGAGCCTCTGTACAGCCAGCCCCCCCCACGCAACTTCAGAGTGGAACGCCCTGCCAGCGCCCTCCCTCTGGCCTTCGACTCACCCCCTACGCAGCTCTTCTCCCTCAATAAGGAGGAGCTGCGGAAGGTGTGCGGGGAGGAGGGATCGCGTGTCTACAGCCAGGTCACCGTGCAGAAGGCCCAGCTGGAGAAGAGCCGTGGAGACTCTGAGCTGCAAGAGATCATGAAGAGACAGCAAGAGAGAATCAACTCCACCTCACAGGAC

Function

GO: NA

KEGG:

id description
K17277 EPS8; epidermal growth factor receptor kinase substrate 8

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006996 True 1488 mRNA 0.60 15 365990 379890

Neighbor

gene id symbol gene type direction distance location
AMCG00006995 NA coding downstream 37279 317616 ~ 328711 (-)
AMCG00006987 ddb1 coding downstream 124530 226095 ~ 241460 (-)
AMCG00006988 NA coding downstream 167161 195304 ~ 198829 (-)
AMCG00006978 NA coding downstream 222809 140536 ~ 143181 (-)
AMCG00006981 NA coding downstream 228257 127488 ~ 137733 (-)
AMCG00007002 NA coding upstream 84679 464569 ~ 472311 (-)
AMCG00007003 NA coding upstream 93968 473858 ~ 478272 (-)
AMCG00007004 NA coding upstream 108765 488655 ~ 509749 (-)
AMCG00007009 NA coding upstream 173425 553315 ~ 554154 (-)
AMCG00007010 NA coding upstream 175184 555074 ~ 565774 (-)
G20446 LOC103368535,LOC104922780 non-coding downstream 12519 346274 ~ 353471 (-)
G20423 NA non-coding downstream 48876 310713 ~ 317114 (-)
G20424 NA non-coding downstream 56164 308009 ~ 309826 (-)
G20412 NA non-coding downstream 59130 304589 ~ 306860 (-)
G20395 NA non-coding downstream 106510 259091 ~ 259480 (-)
G20465 NA non-coding upstream 43444 423334 ~ 424778 (-)
G20501 NA non-coding upstream 166166 546056 ~ 546501 (-)
G20507 NA non-coding upstream 208435 588325 ~ 588602 (-)
G20510 NA non-coding upstream 215587 595477 ~ 595770 (-)
G20604 NA non-coding upstream 439085 818975 ~ 823764 (-)
AMCG00006997 NA other downstream 3696 356618 ~ 362294 (-)
G20397 LOC100846954 other downstream 105754 259583 ~ 260236 (-)
G20388 ddb1,LOC107681355 other downstream 133496 230324 ~ 232494 (-)
AMCG00007001 NA other upstream 28949 408839 ~ 414126 (-)
G20609 NA other upstream 466039 845929 ~ 917829 (-)
G20630 NA other upstream 572346 952236 ~ 953062 (-)
AMCG00007059 NA other upstream 1762785 2142675 ~ 2196855 (-)
AMCG00007072 NA other upstream 2265015 2644905 ~ 2663649 (-)

Expression


Co-expression Network