AMCG00007008


Basic Information

Item Value
gene id AMCG00007008
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 566445 ~ 568523 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007008
ATGAAGGCCACCCACAGCTTTGAGTGCTGGTGTGTGTACCAGGGCCAGGAGTACCCAATGAATGCTGTGATCTACAGCACCACAGATGGCATCGGGGGCTGCATCAGTGCCATCTGTGGTGCCAATGGGACCATCCATCGTGAGATCAGCCCCTGCGCCAGCACCACTGCTgcccccaccaccaccttcaTATTCAGCACTACAGCCAAGCCCTCCTCTACAACCACCCCCCAAGCTTTTTCAACTACTTTCGGTCCACCTTCAACACACTGTGAGGTGGAGACTTGTGAGTGGTCAGTCTGGTACGACAGCCATTACCCTGACCTAGGACCTAACCACGGAGACTTTGAGACTTTTGAAGGGCTCAGGAAGGAGGGCTTCCCAGTGTGCAAGGATCCCACAGACCTACAGTGTGAGGCAGCCATGTACCCCGACACACCCCTGGCTGAGTTGGGACAGGTGGTGCAGTGCGACAAGGCCTTTGGGCTCATGTGCCAGAACGAAGATCAGAACCCACCCATCTGCTACAATTATAGAATCAGAGTGCTATGCTGCAGCTCCAAACCCTGTGCAGCAACATCCCCTGGACAAACCACACCCAGTCAGACCACATCCAAGAAGAGCACACCTGAGAATACCTCAGCTGGTAAGACCACGCCTGGACACACCACAACTGGGCAGACATCTCAGGGCCAGACCACACCTGGTAGGACCACACCTGGACAGACTACACCTGGACAAACTACACCTGGACAGACCACATCTGGGAAGACCACACCTGGACAGACCACCCCTGAGCTTACCACATCTGGACGGACATCACCTAGGCAAACCACATCTGGTCAGTCCACATCTGGACAGACCACACCTGGGAAGACCACACCTAGACAGACCACACCTGGTCAGTCCACACCTGTACAGACCACGAAGACTCTGTTCACATCCAGCAGTGTCCCCACCTCCCTGTCCACCAGCTCCCCTACTACCTGCAGGCGCCAGTGCCAGTGGTCCGAGTGGTTCAACACCCACCTGCCCACCTTTGGCTCAGAGGAGGGGGACTTTGAGAGCTTCGGAGACATCAGGCAGAACGGAAGCAAGATCTGCACTGAGCCATCCAAGGTGGAGTGCACGGCGGTCAAGTTCCCCAATAGGACAATAGAGGAGGTGGGACAGGTCGTGAAGTGCAGCGTCACCAGCGGCTTGCTCTGCAGGAACAAGGACCAAACCGGAGCTCTGCAGCTGTGCTACGACTACAAGATCCGGGTGCAGTGCTGCAGCTTTGCATACAACCTCAGCCACAGGGAAAACGACCACTGCAGGTGCAACATCTGGACAATCTACCTCTCCGGGGAAAATTGCCACAGGGAGCACAGAGCAAAGTACTCAGGAACACACCACCCCAAGGGGATCCACAGCGTTTACTGTGACCTCCAGTACAGGAAATACATCCAAGCCAGCACAGACAACATCAGCTACTCTTACGTCTGCTCATGTTTCAGCCCCAGGGACAACAACTTCCCATCCTTTGAGCACGAATGCAGGCCCAACAGAAGCCACGTCTGCCACAACATCCCTGGTCCCCATCACATCCACCCCAGCTGTCAGAACAGGATCCACGATCGCCCCCTCCACCGAGAGGCTTGTATCCACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007008 True 1653 mRNA 0.56 4 566445 568523

Neighbor

gene id symbol gene type direction distance location
AMCG00007010 NA coding downstream 671 555074 ~ 565774 (-)
AMCG00007009 NA coding downstream 12291 553315 ~ 554154 (-)
AMCG00007004 NA coding downstream 56696 488655 ~ 509749 (-)
AMCG00007003 NA coding downstream 88173 473858 ~ 478272 (-)
AMCG00007002 NA coding downstream 94134 464569 ~ 472311 (-)
AMCG00007007 NA coding upstream 1612 570135 ~ 582565 (-)
AMCG00007005 NA coding upstream 60252 628775 ~ 639952 (-)
AMCG00007011 NA coding upstream 86343 654866 ~ 658913 (-)
AMCG00007006 NA coding upstream 100641 669164 ~ 670865 (-)
AMCG00007015 NA coding upstream 155938 724461 ~ 724961 (-)
G20501 NA non-coding downstream 19944 546056 ~ 546501 (-)
G20465 NA non-coding downstream 141667 423334 ~ 424778 (-)
G20446 LOC103368535,LOC104922780 non-coding downstream 212974 346274 ~ 353471 (-)
G20423 NA non-coding downstream 249331 310713 ~ 317114 (-)
G20424 NA non-coding downstream 256619 308009 ~ 309826 (-)
G20507 NA non-coding upstream 19802 588325 ~ 588602 (-)
G20510 NA non-coding upstream 26954 595477 ~ 595770 (-)
G20604 NA non-coding upstream 250452 818975 ~ 823764 (-)
G20607 NA non-coding upstream 260574 829097 ~ 829524 (-)
G20612 NA non-coding upstream 334396 902919 ~ 903735 (-)
AMCG00007001 NA other downstream 152319 408839 ~ 414126 (-)
AMCG00006997 NA other downstream 204151 356618 ~ 362294 (-)
G20397 LOC100846954 other downstream 306209 259583 ~ 260236 (-)
G20388 ddb1,LOC107681355 other downstream 333951 230324 ~ 232494 (-)
G20609 NA other upstream 277406 845929 ~ 917829 (-)
G20630 NA other upstream 383713 952236 ~ 953062 (-)
AMCG00007059 NA other upstream 1574152 2142675 ~ 2196855 (-)
AMCG00007072 NA other upstream 2076382 2644905 ~ 2663649 (-)
AMCG00007091 ckap5,LOC108269026 other upstream 2907545 3476068 ~ 3500670 (-)

Expression


Co-expression Network