AMCG00007010


Basic Information

Item Value
gene id AMCG00007010
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 555074 ~ 565774 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007010
ATGGCACACACCACTTCTCCATTTGTCTCTTCAACCACCAGCACGAGACCCACCACAGGGAGACCTACCAGCCCTGGGCAGTCCACAGAGCCAGCCAGCTCTCCCAACACACCATGCATTTGCAATGCCAATGGGCAGAATTTTCCCCCTGGTGCTTTGATATACAACACCACAGACAGTGCAGGCTGGTGTTACACTGCTCTCTGCAATGCAACCTGTGGGATTGAGAAGAAGGCATCCGAATGCCACTCCACCCCTACTCCCTCCACCACCACTGCCCCAAGCACCGCTGCAAAAACAACCGCCCCTGGGACAACAGATGCCCCCACAACTACAGTAGCCCCAGAGACCACCAGCCCTGCTCCTGAGAAGGAGTGTGCTGCCCTGACGCCCCCCAGAAAGCTCAATGAGACCTGGAAGCTGGATAGATGCACTGAGGCCACCTGCAAAGGGAACAACCAGATTGAGGTCAATCCCATCCTCTGCAAACCAGCTGAGAAGGTCACCTGTGCCAATGGACGCCCCGCCCGCAAAATATACGATGATAGCGGCTGCTGTTACACCTACACCTGTGAATGTGAGTTAGCAACTGACCTGCACAGCGCCAGTCGAGCTCTGGGGGTGTTTTTCGATGGTAGACGAGTCTTCCCCAACCTTTACAAGAGTGGATTCAAGATCTTCTCCACAGGCATCAGCATGCATGTCCAGATCATGGAAATCAAGGTGCACGTGGCATATGCAGGCATGATCTCTGTTGTCACTGTGCCATACAAACTGTTCTCCCACAACACAGAGGGACTCTGCGGTACCTGCAGCAACACAAGGGTGGAGGACTGCAGACTGCCTAGCGGAGATACAGCTGCCACCTGCACCAAGATGGCTCCAGACTGGAAGGCTCCTGGGCAGGATAGCCCTGCCTGTATGAGCACAACTCCACTGCCTCCCACCAGTCCTGCGACAAGTACCAAGCACGCTCACCCCACTACATCTGGGCCATCCACCACCCTCTTGTTACCTACCACTCACAAGACGACACTGAAGGGCAAACCAGTTACCCAACACAGAGTGCCAGACATCAGCAGAGACTGTGCTGGGTACCGTGGGCCCCACAGGGACCACATCGAGAAGGACCACACCTGGGGAAATGACGACAGGAAAGACATCACCTGGTCAGACCACATCACCAGGCCACACAACATCTGTACAGACCTCACCTGA

Function

GO: NA

KEGG:

id description
ko05206 MicroRNAs in cancer

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007010 True 1218 mRNA 0.55 7 555074 565774

Neighbor

gene id symbol gene type direction distance location
AMCG00007009 NA coding downstream 920 553315 ~ 554154 (-)
AMCG00007004 NA coding downstream 45325 488655 ~ 509749 (-)
AMCG00007003 NA coding downstream 76802 473858 ~ 478272 (-)
AMCG00007002 NA coding downstream 82763 464569 ~ 472311 (-)
AMCG00006996 NA coding downstream 175184 365990 ~ 379890 (-)
AMCG00007008 NA coding upstream 671 566445 ~ 568523 (-)
AMCG00007007 NA coding upstream 4361 570135 ~ 582565 (-)
AMCG00007005 NA coding upstream 63001 628775 ~ 639952 (-)
AMCG00007011 NA coding upstream 89092 654866 ~ 658913 (-)
AMCG00007006 NA coding upstream 103390 669164 ~ 670865 (-)
G20501 NA non-coding downstream 8573 546056 ~ 546501 (-)
G20465 NA non-coding downstream 130296 423334 ~ 424778 (-)
G20446 LOC103368535,LOC104922780 non-coding downstream 201603 346274 ~ 353471 (-)
G20423 NA non-coding downstream 237960 310713 ~ 317114 (-)
G20424 NA non-coding downstream 245248 308009 ~ 309826 (-)
G20507 NA non-coding upstream 22551 588325 ~ 588602 (-)
G20510 NA non-coding upstream 29703 595477 ~ 595770 (-)
G20604 NA non-coding upstream 253201 818975 ~ 823764 (-)
G20607 NA non-coding upstream 263323 829097 ~ 829524 (-)
G20612 NA non-coding upstream 337145 902919 ~ 903735 (-)
AMCG00007001 NA other downstream 140948 408839 ~ 414126 (-)
AMCG00006997 NA other downstream 192780 356618 ~ 362294 (-)
G20397 LOC100846954 other downstream 294838 259583 ~ 260236 (-)
G20388 ddb1,LOC107681355 other downstream 322580 230324 ~ 232494 (-)
G20609 NA other upstream 280155 845929 ~ 917829 (-)
G20630 NA other upstream 386462 952236 ~ 953062 (-)
AMCG00007059 NA other upstream 1576901 2142675 ~ 2196855 (-)
AMCG00007072 NA other upstream 2079131 2644905 ~ 2663649 (-)
AMCG00007091 ckap5,LOC108269026 other upstream 2910294 3476068 ~ 3500670 (-)

Expression


Co-expression Network