AMCG00007058


Basic Information

Item Value
gene id AMCG00007058
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 2205128 ~ 2218145 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007058
AGCGCCGGAGATTATTTTGGGGTTGCCGTTTTGCGAAGCCATAGACATGTGGTCACTGGGCTGTGTGATTGCAGAGCTGTTCCTCGGATGGCCGCTGTACCCTGGGGCTCTGGAGTATGATCAGATTAGATACATATCTCAAACACAAGGGTCACCTGGGGAGCATTTGCTGAATGTGGGGACAAAAACTGCAAGGTTTTTTTGCAAGGATTCTGATTCCCCCTATGCAGGGTGGAGACTGAAGACAACAGAGGAACATGAAACGGAGACAGGGATGAAGTCAAAGGAAGCCAGGAAGTACATCTTCGGCTGTTTGGATGATATAGCGCACgtGAACATGGTAATGGATTTGGAAGGAAGTGACTTGTTAGCAGAGAAGGCAGATCGCAGAGAGTTTGTCAGTTtgttgaagaaaatgttattgatCGATGCTGATAAAAGAATCACCCCAGCAGAGACCATGAGCCATCCCTTTGTCACCATGCAGCACCTCCTCGACTTTCCTCACAGCAACCAtgtgAAATCCTGTTTCCACATAATGGATGTTTGCAGATCACGGTCAAACACCTACGATGTAAGCAATCGCAATAAGACTCCATTCATGAGACCCGTCACCTCAAGCAATGCAGCGAATCTGACGGTGGCTTTTAATAAGATGGGCACCGTTCACACTCAAgCTTTAGCACCATCTGGTCCATCTGTGATGCACCATGGGATACCACTGCAGACAGGAAGTGCTCAGTTTGGTTGTAATGATTCTTTTCAGCAAGCATTGATCCTCTGCCCCCCAGCTATTCAAGGAATTCCCACTAATCCCAGCAAGCCTGCTGGTTACTCCGTAAGAATGGACAATACCATGCCTTTAGTAACCCAAGCGCCCCCCATGCAGCCATTGCAGATTCGACCAGGTGTTATAACCCAGACCTGGTCAAACAGGACCCAGCAGATCCTGGTCCCGGCCTGGCAGCAGGTAACTCCCATGGCCCCGTCTACCACAGCGCTGGCCGCCGACACCGTGGCCGTCCCACAGAGACTGGGAGATTGGGGGAAAGTGCAGCCACATGGCAACCATTACGGCTCCATGATGCCACAGCCTCTTCTAACCAACCAAATGACCATGTCAGCACACCAGCCCATAAGCATAGGTATCGCCCATGTAGTGTGGCCCCAGCCAGCTGCTAACAAGAGAAACAAGCCCTGCCAGAACAGGAGTAACAACATCCTACACAACACCAACACGCAGAACCAGATACGCATGTCCCCAAAGATAGCCGATAATGCTAAAAACGCGCAGGAGCAGAGCTGCGTCGCGAGGACGCAGGACAATCGcaaccctgagagagagacacggagCTGCTGCAAGGCAGGGCAGGACCCTGGCGACCTGGCCATTTCCAACAAGCAGCGCCACACCATCATCATCGCAGACTCCCCCAGTCCCGCGGTCAGCGTCATCACCATCAGCAGCGACACGGACGACGAGGAGACGACCCAGAGACACTCGCTGGGAGAATGTGAGGGCAGTCCAGATTGCGAAGCCTGTCAGAGCACGCTGAACATTGACCGCGTGTGTTCGTTGAGCAGTCCTGACAGCACTCTCAGCACCAGCTCCTCCAACTCTGTGCAGTCCAGCCCATCCCCCTGTAAAAGACCCAACAGCATGTCGGACGACGAGCAAGAGAGCGGCTGTGACACAGTGGATGGCTCGCCGGCGTCCGACTCCTCCGGACAGAACGATAGTCCTTTCATGGAGAGCAGGTTTCTCCCAGACACCAACCAGAACCGAGAGACCCGAGTGCCGCCAGTGACGGAGCCCAGCAAGCCCGTGGTGCGCACCATGGTGGTGCCACCGATGAGAGTGCGAAACAACAACTCCGTGGCTGAGGACCAGATGGCCAACACAGATGCCTCATGTCAGTCGCTGTTCAAGGGCCGCTCTGGACACGGCAGGCCAAACCACCACTCGGGCCCGATCGCTCGCCAGCAGAAGATGGCCGCCGCATTCCAGCCCCAGCACCTCGGCTTCGGACAGGTCCAGCACTACGGATCCTGCCATCAGGAGTGGAACGGGAACTACGGTCACCGGCGGCAGCAGGCCTACATCCCCCCCACGGTCCACGGGCACACCTTCACCCTGCCCCACGGGAGCCCCAATCACACTACAGCGCACCCCCACCTGCCCGGCAACACTCACCTCGGGGGGCAGCCGGCTCTCTTGTCCTACCCCCCGTCTGCCACGCTGGGCACCGCCGCGCCCGTTGCGCACATTCTGGCGTCCCCATGTACTACCAGGCCCGTCATGCAGTCTGCCTACAGCATCTCTCACCCCGGCGGCATCGTGCATCAAGTAACCGTGGGCATCAACCACCGCCTGCTGCCTTCCCCCACCATCCACCAGAACCAGTTCAAACCAGTATTCCCCACCCATTCGTACATCGCCGCATCACCTGCTTATGCCGGATTCCCGCTCAGTCCCACCAAACTCAGCCAGTACCCTTACATC

Function

GO: NA

KEGG:

id description
K08826 HIPK; homeodomain interacting protein kinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007058 True 2503 mRNA 0.56 14 2205128 2218145

Neighbor

gene id symbol gene type direction distance location
AMCG00007060 NA coding downstream 280245 1915302 ~ 1924883 (-)
AMCG00007052 syt9,LOC106573278,LOC106561481 coding downstream 342955 1844655 ~ 1862173 (-)
AMCG00007053 NA coding downstream 380591 1821951 ~ 1824537 (-)
AMCG00007054 NA coding downstream 410489 1759494 ~ 1794639 (-)
AMCG00007051 NA coding downstream 448786 1755590 ~ 1756342 (-)
AMCG00007057 hipk3,LOC105899775 coding upstream 20022 2238167 ~ 2244432 (-)
AMCG00007062 NA coding upstream 72258 2290403 ~ 2297881 (-)
AMCG00007063 NA coding upstream 84238 2302383 ~ 2310199 (-)
AMCG00007065 NA coding upstream 108467 2326612 ~ 2346701 (-)
AMCG00007066 NA coding upstream 131893 2350038 ~ 2363800 (-)
G20870 NA non-coding downstream 32645 2171904 ~ 2172483 (-)
G20795 NA non-coding downstream 474649 1676304 ~ 1730479 (-)
G20802 NA non-coding downstream 477961 1722556 ~ 1727167 (-)
G20726 NA non-coding downstream 824018 1378456 ~ 1381110 (-)
G20676 NA non-coding downstream 1213129 990555 ~ 991999 (-)
G20914 NA non-coding upstream 68679 2286824 ~ 2288618 (-)
G20947 NA non-coding upstream 209014 2427159 ~ 2427421 (-)
G20965 NA non-coding upstream 329859 2548004 ~ 2548289 (-)
G20976 NA non-coding upstream 410952 2629097 ~ 2637796 (-)
G21020 NA non-coding upstream 684417 2902562 ~ 2903620 (-)
AMCG00007059 NA other downstream 8273 2142675 ~ 2196855 (-)
G20630 NA other downstream 1252066 952236 ~ 953062 (-)
G20609 NA other downstream 1287299 845929 ~ 917829 (-)
AMCG00007001 NA other downstream 1791002 408839 ~ 414126 (-)
AMCG00006997 NA other downstream 1842834 356618 ~ 362294 (-)
AMCG00007072 NA other upstream 426760 2644905 ~ 2663649 (-)
AMCG00007091 ckap5,LOC108269026 other upstream 1257923 3476068 ~ 3500670 (-)
G21426 NA other upstream 2823514 5041659 ~ 5049520 (-)
G21429 NA other upstream 2838642 5056787 ~ 5057406 (-)
G21632 psmc3,prs6a,LOC107758446 other upstream 3598664 5816809 ~ 5820284 (-)

Expression


Co-expression Network