AMCG00007060


Basic Information

Item Value
gene id AMCG00007060
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 1915302 ~ 1924883 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007060
ATGCTTTGCAGGAGAGCAGCGCCCTCTGCTGAATTCTCCGTGGACCGGACCCGACACCTGATGTCCTTCCTCACCATGCTAGGGCCGAGCCCGGACTGGAACGTAGGCCTCTCAGCCGAGGATCTCTGCACAAAGGAGTGTGGCTGGGCTCAGAAAGTGGTGCAGGACATGATACCATGGGATGCCGGCACAGACAACGGGGTAACTTATGAGTCACCCAACAAACCAACAGTTCCTCAAGAGAAAATTAGACCACTGACCAGCCTGGACCATCCACAGAGCCCGTTCTATGACCCGGAGGGAGGCCCAATTACTCCTGTTGCCAGAGTAGTTATTGAAAGAATTGCAAGAAAGGGAGAACAGTGTAATATCGTCCCTGATAACGTGGATGATATTGTGGCAGATCTCGCGcaagaagaaaaagatgaagATGCGTCCACCTGTATGATGTCAGAGTGGATCACCTGGTCTCCCTGCAGTGTCTCGTGTGGCATGGGCATGAGGTCCAGGGAGCGATATGTCAAACAGTTCCCAGAGGATGGCTCCATTTGCACTTTACCGACAGAGGAGACTGAGAAATGCATCGTCAATGAGGACTGCTTGCCTAGCAGCTGCCTCACGTCAGAGTGGGGGGAGTGGGATGAGTGCAGCGCCACCTGTGGGATGGGTATGAAAAAGCGAGAGCGGATGGTCAAGATGCCTCCATCTGACGGGTCAATGTGCAGCACAGAACTGACTGAGGTGGAGAAATGCATGATGCCTGAATGCCATACCATCCCCTGCATGCTGTCTCCGTGGTCAGACTGGAGCGACTGCAGTGTGACCTGTGGGAAAGGGATGAGGACCCGGCAGCGGATGCTCAAGTCTCCCGTGGAGCTGGGCGAGTGCAACGAGGAGCTGGAGCAAGTGGAGAAGTGCATGTTGCCAGAGTGCCCCACCGACTGCATGGTGTCAGACTGGTCGGAGTGGTCAGAATGCAACAAGTCGTGTGGTAAGGGTCACATGATCAGGACCAGAATGATCAAGCTGGAGCCTCAGTTTGGGGGAGACCCCTGCCCAGAGACGGTACAGCGGAAGAAATGTAAAATCCGAAAGTGTAACCGGGGCTCCAGCGATGAGAAACGACGCCGCAAAGAAgccagagagaaaaggaggagTAAACAAAGCAGAGATGATATTACTGATGAGCAGCACCCGGGATGTAAAATGAGACCTTGGTCAGCATGGACCGACTGCACCAAGCTGTGTGGGGGAGGCATTCAGGAGAGATTCATGACCGTGAAAAAGAGATTCAAGAACGCTCAGTTTACAAGCTGCAAAGACAAGAAGGAAATCCGAGCATGTAACGTGCATCCTTGTTAA

Function

GO: NA

KEGG:

id description
K24427 SPON1; spondin-1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007060 True 1362 mRNA 0.53 8 1915302 1924883

Neighbor

gene id symbol gene type direction distance location
AMCG00007052 syt9,LOC106573278,LOC106561481 coding downstream 53129 1844655 ~ 1862173 (-)
AMCG00007053 NA coding downstream 90765 1821951 ~ 1824537 (-)
AMCG00007054 NA coding downstream 120663 1759494 ~ 1794639 (-)
AMCG00007051 NA coding downstream 158960 1755590 ~ 1756342 (-)
AMCG00007047 NA coding downstream 217469 1659504 ~ 1697833 (-)
AMCG00007058 NA coding upstream 280245 2205128 ~ 2218145 (-)
AMCG00007057 hipk3,LOC105899775 coding upstream 313284 2238167 ~ 2244432 (-)
AMCG00007062 NA coding upstream 365520 2290403 ~ 2297881 (-)
AMCG00007063 NA coding upstream 377500 2302383 ~ 2310199 (-)
AMCG00007065 NA coding upstream 401729 2326612 ~ 2346701 (-)
G20795 NA non-coding downstream 184823 1676304 ~ 1730479 (-)
G20802 NA non-coding downstream 188135 1722556 ~ 1727167 (-)
G20726 NA non-coding downstream 534192 1378456 ~ 1381110 (-)
G20676 NA non-coding downstream 923303 990555 ~ 991999 (-)
G20614 NA non-coding downstream 978800 906596 ~ 936502 (-)
G20870 NA non-coding upstream 247021 2171904 ~ 2172483 (-)
G20908 NA non-coding upstream 275170 2200053 ~ 2308118 (-)
G20914 NA non-coding upstream 361941 2286824 ~ 2288618 (-)
G20947 NA non-coding upstream 502276 2427159 ~ 2427421 (-)
G20965 NA non-coding upstream 623121 2548004 ~ 2548289 (-)
G20630 NA other downstream 962240 952236 ~ 953062 (-)
G20609 NA other downstream 997473 845929 ~ 917829 (-)
AMCG00007001 NA other downstream 1501176 408839 ~ 414126 (-)
AMCG00006997 NA other downstream 1553008 356618 ~ 362294 (-)
G20397 LOC100846954 other downstream 1655066 259583 ~ 260236 (-)
AMCG00007059 NA other upstream 217792 2142675 ~ 2196855 (-)
AMCG00007072 NA other upstream 720022 2644905 ~ 2663649 (-)
AMCG00007091 ckap5,LOC108269026 other upstream 1551185 3476068 ~ 3500670 (-)
G21426 NA other upstream 3116776 5041659 ~ 5049520 (-)
G21429 NA other upstream 3131904 5056787 ~ 5057406 (-)

Expression


Co-expression Network