AMCG00007062


Basic Information

Item Value
gene id AMCG00007062
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 2290403 ~ 2297881 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007062
GAGGACAAGCTGAGTGATGCCAGCGACACCAGGAACACCAGAGCCGACAGCGTTGAAACGTCGGAGCAGTCTCTGAGGAAGAGGAGTCGCCAGAGTACCCCCAGCCCTCAAAGGGCCAACACACCGCAGTCCAGTCCTCCCAGATTTGTGTCAGTGGAGGAGCTGATGGAGACGGCCAAGGGTGTGACCAACATGGCGCTGGCGCACGAGATTGTGGTGAACGGGGGCTTCAAGGTGAAACCCACCAACTTGGCAGACGGCAGTTTGGAAAAAACAGTGCGGGATATTGTGcacaaagcattctgggattgcCTGGATGCACAGCTGAGTGAAGACCCTCCAACATACGATCATGCAATCAAGCTGCtgggagagatcaaggagACGCTGCTGTCATTCTTGCTTCCGGGACACACTCGTCTGCGGAACCAGATCAACGAGGTTCTGGATCTGGAGCTGATCCGACAGGAGGCGGAGAACGGGGCGCTAGATATCAACAAGCTTGCAGAGTTTGTCATCGGCATGATGGGGACGCTGTGCGCGCCGTCCCGGGACCAGGAGATCAAGAAGCTGCGCAGCATCACCGTCATCGTGCCGCTGTTCAAGGCAATCTTCTCAGTAATGGATTTAATGAAGATTGACATGGCTAATTTTGCACTTTCCACAGATGCCTTGGACTTCACTCGAGCGTGGCTCCACAACACGGCGAATGCTCTGCTCAACGCAGACGTGGAGGTCAGCCCCTCTGGTGCCGGCGCCACCTGCAGCCCCCCGGCGCTCTGTCCTACCTCCCTGCACAACCGTGCCTACCTGAACCTGCTGCAGTGGGACCACACCAGCGCCCCCTTCCCCGAAACTCTGCTAATGGACGAGACTCGGTTTCAAGAAATGCACAtggagctggagcagctgaCGGTCATAGCCGCAGTGCTGTTGATCACGTACAACATCACCGGGGCAGCGATCTCCGGCCTCTCGGGGTTCGCTGAGAAACTCAAGAACACAATCAAGGTGTTGTTGACGGGAATGCATCATCCCTCCTTTAACACCAGCGAGGCCTTTGCTACAATTAGCGAGAAGATATGTGTGGAAGTCAATAGCTGCCTATCGCAACATGGGTTCACGCCGTTTTCTGCTGACAAAGAGGCTGTGTTGAAAGGACAGATTGACGCAGTGAAAAATTCAGACAATTCCATCCGCAAACTCATCGATTCTCGCATTCAAACCTTTCTAATGGGCTACCTTGACTCCAGCCACCAGAAACCCAGCACTGCAGTACCAGGGGGTCTGGTTCCCATTCAGAGAGAACTGGAGGAGATTGCAGTCAAATTCAGCCGCCTGGTCAACTACAACAAAATGGTCTTTTCCCCGTACTACGAGCAAATCCTCAAGGAGATTCTCAGCGAGGGAGAGCAGCAGGAAAAAAAGCTGGACAAGGACGAAGACCAGCGGATCTTT

Function

GO: NA

KEGG:

id description
ko04138 Autophagy - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007062 True 1458 mRNA 0.54 9 2290403 2297881

Neighbor

gene id symbol gene type direction distance location
AMCG00007057 hipk3,LOC105899775 coding downstream 45971 2238167 ~ 2244432 (-)
AMCG00007058 NA coding downstream 72258 2205128 ~ 2218145 (-)
AMCG00007060 NA coding downstream 365520 1915302 ~ 1924883 (-)
AMCG00007052 syt9,LOC106573278,LOC106561481 coding downstream 428230 1844655 ~ 1862173 (-)
AMCG00007053 NA coding downstream 465866 1821951 ~ 1824537 (-)
AMCG00007063 NA coding upstream 4502 2302383 ~ 2310199 (-)
AMCG00007065 NA coding upstream 28731 2326612 ~ 2346701 (-)
AMCG00007066 NA coding upstream 52157 2350038 ~ 2363800 (-)
AMCG00007067 eif3m,LOC107758039,LOC107671036 coding upstream 78255 2376136 ~ 2382023 (-)
AMCG00007070 rcn1,LOC102786392 coding upstream 164273 2462154 ~ 2475341 (-)
G20914 NA non-coding downstream 1785 2286824 ~ 2288618 (-)
G20870 NA non-coding downstream 117920 2171904 ~ 2172483 (-)
G20795 NA non-coding downstream 559924 1676304 ~ 1730479 (-)
G20802 NA non-coding downstream 563236 1722556 ~ 1727167 (-)
G20726 NA non-coding downstream 909293 1378456 ~ 1381110 (-)
G20947 NA non-coding upstream 129278 2427159 ~ 2427421 (-)
G20965 NA non-coding upstream 250123 2548004 ~ 2548289 (-)
G20976 NA non-coding upstream 331216 2629097 ~ 2637796 (-)
G21020 NA non-coding upstream 604681 2902562 ~ 2903620 (-)
G21034 NA non-coding upstream 624779 2922660 ~ 2923027 (-)
AMCG00007059 NA other downstream 93548 2142675 ~ 2196855 (-)
G20630 NA other downstream 1337341 952236 ~ 953062 (-)
G20609 NA other downstream 1372574 845929 ~ 917829 (-)
AMCG00007001 NA other downstream 1876277 408839 ~ 414126 (-)
AMCG00006997 NA other downstream 1928109 356618 ~ 362294 (-)
AMCG00007072 NA other upstream 347024 2644905 ~ 2663649 (-)
AMCG00007091 ckap5,LOC108269026 other upstream 1178187 3476068 ~ 3500670 (-)
G21426 NA other upstream 2743778 5041659 ~ 5049520 (-)
G21429 NA other upstream 2758906 5056787 ~ 5057406 (-)
G21632 psmc3,prs6a,LOC107758446 other upstream 3518928 5816809 ~ 5820284 (-)

Expression


Co-expression Network