Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00007134 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 5034707 ~ 5043173 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00007134 | True | 894 | mRNA | 0.66 | 5 | 5034707 | 5042296 |
| TU26769 | False | 892 | lncRNA | 0.49 | 1 | 5042282 | 5043173 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00007128 | NA | coding | upstream | 46492 | 4986610 ~ 4988215 (+) |
| AMCG00007127 | NA | coding | upstream | 53797 | 4976719 ~ 4980910 (+) |
| AMCG00007126 | NA | coding | upstream | 67511 | 4963434 ~ 4967196 (+) |
| AMCG00007124 | NA | coding | upstream | 150482 | 4877191 ~ 4884225 (+) |
| AMCG00007125 | NA | coding | upstream | 160001 | 4867797 ~ 4874706 (+) |
| AMCG00007135 | NA | coding | downstream | 62873 | 5106046 ~ 5107518 (+) |
| AMCG00007141 | NA | coding | downstream | 315366 | 5358539 ~ 5359435 (+) |
| AMCG00007144 | NA | coding | downstream | 380265 | 5423438 ~ 5436694 (+) |
| AMCG00007143 | atg13,LOC106587118 | coding | downstream | 408804 | 5451977 ~ 5465081 (+) |
| AMCG00007142 | NA | coding | downstream | 422884 | 5466057 ~ 5471032 (+) |
| G21292 | NA | non-coding | upstream | 659359 | 4375136 ~ 4375348 (+) |
| G21252 | NA | non-coding | upstream | 753558 | 4280924 ~ 4281149 (+) |
| G21251 | NA | non-coding | upstream | 754077 | 4280423 ~ 4280630 (+) |
| G21250 | NA | non-coding | upstream | 754751 | 4279685 ~ 4279956 (+) |
| G21248 | NA | non-coding | upstream | 755024 | 4279484 ~ 4279683 (+) |
| G21416 | NA | non-coding | downstream | 1456 | 5044629 ~ 5048683 (+) |
| G21521 | NA | non-coding | downstream | 452176 | 5495349 ~ 5495671 (+) |
| G21528 | NA | non-coding | downstream | 470621 | 5513794 ~ 5514142 (+) |
| G21585 | NA | non-coding | downstream | 704767 | 5747940 ~ 5752925 (+) |
| G21683 | NA | non-coding | downstream | 1035570 | 6078743 ~ 6125287 (+) |
| G21411 | NA | other | upstream | 80426 | 4942690 ~ 4954281 (+) |
| G21400 | NA | other | upstream | 113905 | 4918366 ~ 4920802 (+) |
| AMCG00007118 | NA | other | upstream | 576403 | 4454873 ~ 4458304 (+) |
| AMCG00007104 | shank2,LOC108440598 | other | upstream | 935098 | 4076080 ~ 4099609 (+) |
| AMCG00007073 | NA | other | upstream | 2341225 | 2677141 ~ 2693482 (+) |
| AMCG00007146 | prdm11,LOC106560765,LOC105018678 | other | downstream | 461832 | 5505005 ~ 5523713 (+) |
| AMCG00007147 | fbxo3 | other | downstream | 509220 | 5552393 ~ 5562154 (+) |
| AMCG00007148 | NA | other | downstream | 522768 | 5565941 ~ 5580294 (+) |
| AMCG00007154 | ptpmt1,LOC102795413 | other | downstream | 625023 | 5668196 ~ 5672145 (+) |
| AMCG00007160 | NA | other | downstream | 714504 | 5757677 ~ 5775456 (+) |
