AMCG00007146 (prdm11,LOC106560765,LOC105018678)


Basic Information

Item Value
gene id AMCG00007146
gene name prdm11,LOC106560765,LOC105018678
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 5505005 ~ 5523713 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007146
TTCGCGTCTTTGATTTGGGGGGTCCCTGTCTGGCCTCAAGTTGCTTTCTTCCGTTTTCCATGTCATTTCCTGTAATAAAAAGATGGTGGTCCAAGCTAAGAGAAGCAGCTGACTCGCTGAAATTATTTCAGATCGAAACTTTACCTCGCCTGGGACTAGTGAATCAGAGAGCAGCCGGCGCGTCCTGGGGGGCGGCGCGGCGGGGACACTCGGGATCGGGGCGCAAAGGGGGCGCAGACGGGACCCGCGGAGGGCTGCGGATCGTGGGGAAGCCCTGGCATAATCAGACTTTGCTGGGAGTCACAGGTCGCCCTGCTCCGAGAGCCCAGCGATGGCAGAGGCCACTGCTTCCCACAAAGAGTCGGCCCCTATAGATGAGCCCAACTGCAGCAAGAGCAGAATAAAAGAAGAGGACCACCATCCATCAGAAGAACCAAAAAAGAAGCTGAAAGTGAAACACGAGCGCTGCCTGGCGAAAACCTACCAGCAAGTCGATTTCTGGTTCTGTGAAGAGTGTAAGGAGTACTTTGTGGAGGAGTGCCCGGCCCACGGCCCTCCTGTCTTCGCGCCCGACACCCCCGTGGCTGTGGGCGTCCCCAATCGAGCGTCTCTCACCCTACCCCTGGGGATCAAGATTGTGCAGGAGCCGGGGGGGGAGACGGACGTGTGCTGCGTGGACAGAGTCATCCGGAGAGGGGTGCTGTTCGGCCCGTATGAGGGCGAGGTCGTCTCGCAGGACAAGTCGTCTGGCTTTTTCTCCTGGATGATTGTTGACAAGAACAACCAATACAAGTCCATCGACGGCACCgatgaaacaaaagcaaactggATGAGGTACGTGCTGATTTCCCGGGAGGAGAACGAACAGAACCTGATGGCCTTCCAACACAGCGAGAAGATCTATTTCCGTGCCTGCCGGGACATCGCCACCGGGGAGCGCCTCCGCGTGTGGTACAGCGCTGAGTACATGAGGAGGCTGCACAGCATGTCCCAGGAGAGCATCGACCGGAACCTGGCCTCAGGAATGTTGAGTGTAGAAAAATTGGAAGAGCTCCCAGGGAGTCAAGAGGAGACAAAGGGGTCTTTTCTCCGCTCAGCGCTCAGGGGGGGCAGAGGCTCCAGCAAGAGAGCGAACGAGGACAGCGATTGTCAGCCGCACACCAAGAAGAAGAGGATCGACCTCATCTTCAAAGACGTCCTCGAAGCGTCTTTGGAAGCATCGAAGAACTCGGACAACCCTCTGCAACTGAACAGCACTTTCCCCATGAGGACCACCAGGGCCCACCGCACGGCAGAGCTATTCGACCGGCCCAAGACCTCCACCGGCCAGAGCGGTGCCTACCAGACCCTGGAGCGCAAACCGCCCGCCGCGACGTCCGAGTCGTTCTCCGCCGGGTGCTGCGACGAGCCCGAAAACAAAGTGGACGTCCGCTGTGTGAAGACAGAGGAAGCAGATCACAGTCCCGGATTGTCTTGCGACGGACAGGAGAACGAGAGCCCCTCCACCTCCTTTTGTCCCAACTGTGTGAAGCTCAAAAAGAAAATCCGAGAGCTGGAGGCCGAGCTGGACAGGCTGAGGTCTGGACAGCAGCCCGAACCTCTGggtcagccttcgctccccGAGCCATCTCCGCTTGACGAGCTACGAGCCTCCGAGGCGACGACCCCAATTCCCGTCATCATGGACGAGGATGACCAGGATGTGGACTCTGCCGATGAGTCCATCGCGACGGATATGATGGTGGCTGCGGACGAGTCCTCCAAGCTGTCCAGCGGCCCGGGGCGCCGGATCCGCCGGTTCAAACAGGAGTGGCTGAAGAAGTTCTGGTTCCTGCGGTACTCGCCAACGCTCAACGAGATGTGGTGTCACGTGTGCCGCCAGTACACCGTCCAGTCTTCCCGGACGTCGGCCTTCATCATCGGCTCCAAGCAGTTCAAGATCCACACCATCAAGCTGCACAGCCAGAGCAACCTGCACAAGAAGTGCCTGCAGCTGTACAAGCTGCGTATGCACCCGGAGAAGACTGAGGAGATGTGCAGGAACATGACCTTGCTCTTCAATGCCGCCTACCACCTGGCCCTTGAAGGCAGGCCCTTCTCGGACTTCCGGCCATTGGCAGAGCTGCTGAAGAAGTGCGAGCTGAAGGTGGTGGACCAGTACATGAACGAGGGAGACTGCCAGATTCTCATCCACCACATCGCTCGGGCTCTGAAGGAGGACCTCATCGAGAGGATCCGGCAGTCCCCCTTCCTCAGCATCATCATGGATGGTCAGAACGACGACCCGCTGGCCGACATGGTGGCCGTGTACGTGCAGTTCACCACCAGCGACGGCCCCCCCGCCACCGAGTTCCTCTCCCTGCAGGAGCTGAGCTGCGCCAACACAGATGGGTACCTGCAAGCCATCGAAAGGGCCTTCGGCGTGTTGGGGTTGAGGCTGCAAGACGTGTTGATCGTGGGCTTGGGCATCGATGGATCCAACATCTCCTCCGGATTGAGGGCCAACCTCTATATCACTGTGAGGAAGACCCTTCCCTGGGTGCTCTGTCTTCCTTTCATGATCCACCGACCCCACTTGGAAGTCCTGGATGCCATCAGTGGAAAGGAGCTCTCCTGCCTGGAGGACCTGGAGAACAACTTGAAACAGCTGCTCAGCTTTTATCGCTATTCCCCTCGTATGATGGCAGAGCTGAGAGCCACCGCACCCACACTCTCAGAGGAAACCGAGTTCCTTGGCGATATCAGAGCCGTCCGGTGGATAATTGGGGaaccaaatgttttaaatgctttgatAAAGGATTACCTGGAGGTGGTGGCCCATCTCAAGGAGATCAGTAGTCAGACCCAAAGAGCAGATGCCGCTGCCATCGCGTTGGCTCTGCTGCAGTTCCTTATGGACTACCAGTCTGTCAAGCTCATCTACTTCTTGCTCGACATCATCGCGGTCCTCTCCCGCTTGGCCTTCGTCTTCCAGGGAGATTACCTCCTAGTCTCCCAAGTGGACGGCAAGATTGAAGACGCCATCCAGGAGATCGGCAGACTGGCCGACTCTCCCGGGGAGTACCTGCAGGAGTTTGAAGAAAACTTCAGGGAAAGCTTTAATGGGGTGGATCTGAAGAACCTCCGAGTTGCAGAGTCAAAGTTTCAGTCTATCAGGGAAAAGATCTGTCAGAAGACCCAGGTGATCCTGTCTCAGCGCTTTGACCCTCGGAGCCAGCCCATCGTCAAAGCCTGCCAAGTTCTGGACCTGGCTACCTGGCCAAGGAACACGGATGATCTCATGACCTACGGGGAGGAGGAAATACTGCTCATCTTCGATCACTTGGAAGCCATTCCATCCGTGGCCAGGGAGGTGTCTCGAGAAGGCGTTGATGTTCGAGGAAGCTTGGTGGTCGAATGGAGAGACCTCAAGGCCGACTACTACAGCCTAAATGGATTGAAAGAGGTCATCGGccatatatgtaaatacaaacaGAGGTTCCCACTCCTGAACAGAATTATCCAGATCATCAAAGTGTTGCCAACCTCCACGGCTTGCTGCGACAAGGGCCGCATTGCCCTGCAAAAAGTACGGAAAAACAACCGATCGCGCCTCACTCTGGAACAGATGAACGACCTGTTGACGCTGGCTGTCAACGGACCTCCCATAGCGAACTTTGATGGCAAGAGACCGTTGGACAGCTGGTTTGAGGAAAAATCAGGGAACAGCTACACTCTATCAGCTGAGATGTTGAGTCGGATGTCGACCACCGATCAAAAGTCAGTGCTGCACGGAATGGACATAAACAACGAGTTTTACCCTGACATCTGATCTCTCATATGCTCACGCTCAAGCGGAACGATTCCAAAAGCCATGAAATCCGAGTCCTGGAGAGGAGTCGCCAGGATTGTCAAGCGATTGTGAAACCAATTGACAGTCGCGTTGCTGCTAAGCTGGACTGGACAGGTGTGCTATTTTCATGTATgaaacttaaaatgtataatagcTTGAATTATATACTGAATTTAATagagtatatattataaaagaaGCCAATTTATCGTACCTTCAATACAtccagcaacaaaatgtgatgtATTCTAAACTGGTGTGGGTTTTTGTCATGCCTTTCTAAGGGGTTAGCTGTAGCAGAACCAGAGCAAATTTTAAGTGGGCTATTTTATACTCGTTTTCTTAAAGCAGTAGGTATTAATGGTTACAGAATGTGTCTTTGGTATCGTTGTCTGTTTAAGGCTCTTCTCTGGTCATTAATAGTTGAGTCTTATCAGTGGAGTTTAATATCAGCGGCCTCAGGGCTCAGCAGATGCTGTCTTCAAAGCACCTCAACTGGGTAGGCATTATAGCCATTGCTGGTTGTGGGTTAACAGAAATTGCACTACGTTACATTAGTAGACACCTCAAATGGATTTATTTAGTTGAATTGCTCAAAAGGAACCCCATGTCCATATTACAGACTTATTGGGAGAAGAAAAGAGACTTTTTAGGGAGGAGGAAATCCACACAGTTAAGGACTACTTTAGTCTATGAATTAAACCATTTTCCTGTCCTGGTCAGAAGGCTagctaaacaaatacaattttccttttgtgtgtCTCTTGAATGGTTCCTTGTTTTGCCTAAAAGCCTTGGAAATTGAAACGCTTAATTCAGAGAGACATAATCAAACTCAGCAACTCACAATCGGACATGGACAATTGTGTGGAACTAAAGGAGACCAGTACAGGTTAACGCAGGCGCACAAGATGTATGGCGGTTTGAATTGAAAGTGTTCTTTACTCTGTGGAATTTTTCAGGGacgtttttttcccccatcccTGTTCAATGGCTCAGACGTCTTGTGGTTCCTGTAATAGGATTGCAATGGACTCTCGAGCTGATGAAGAAAAACTGACTCGGAACATGTGGTGAAGCGTTTCTTTCTAGTCGTCCACGATTGTTTCTCTGTTGTGCCGGCAGTGTTTGTGGCTTCTGTATGTCAGCTGTAAAACGAGACTGTACATGCAGTGAAAGCTCGAAGGCTGGGTAAATCTAGGtacatctttcattttattttattttctaaaagccATATTTAGTTGTGCCACACAATTAACAGTCAACCAGTTCCCAAATCCTTCAAACGTAAGGAAAAAGTACGGTGCTATTACCCACGTGGGGCGTGCGATTATGATTCACTCTCTGTTGTCTATATGTGGTGTGTTTCAGTTCGTAAGCTTTTCCAAGGTGTCAGCTACAGATCTTGGTAAAAGGTTTTAGATTGTTTTGCAAACTTATGCTGTTTGACCTGCAGGGGTTAGGACTTTAGAGTTAACACGGCTGAACTGGGAATATATACAGAAGCAGCAACTCGCActtatgcttaaaaaaatgtttatgccTTATTGAGTGGTTAGCAGTATTTTTGCTgctaatacaattatatacatatatacagcataCACACTTCTTTTCCTTGTGCACCCCTTTCCTTTAGCCCTTATGACATTATTACATAAGCTACATTTGGTAACCCATTACTACACTTGTACTGAGACggtttggggaaaataaaaggaattCTCTTCACCATTATATTGAATGTGTAAACGGTTACTTCATTTCATGGAGAGCAGCTGTTTGCTGGTCTCCCCCTCCTGCACTAATGGGCATTTTCAGCAGATGTCACTGTGCCACATTGAAATGcatgcacagcaacaacactgCTACCTGCAGCAGTGAGGGAAATGCTTGCACAGGGAAGGCAATTACAGCCGTGCGACTGAGAGCCTCAGGATATGCACACAGTAAAGACCGGGGCGGTGCGATGTCCCGTAACGCTATGCTGAGGTGAAACGTCAGTCCTGCAAAATCCAACAGTGAATTCTGTCGCCCGTGTTTTCTCTCGGTGTGTTTTCTACTGTCTTCTTGGTCACAGACATTAAATGATAGACCTGACTGCTCTTTGCATTGCTGGCTTGGCTGCtaccagagcccagacttgctTGCCAAATCACACTTTCAAAGTTTACTGGAAACAGGCCAGAATAGCTAAGGGTGGGGAGGGActtagtgttttttaaattgctatttTTGTAATCTGTAATCACTTTATGAGGTAACTGATTAAGTACGCAGTTATCATAATCTTAGAAGCACTTAAACTCGAGTACCAATGCAGTAAGCTCCTGGATGGAGAATGAGCGAGTGTGTGTAAGGAAATTAAATCACCTATCTAAATATGACTAGCATAATTTCAGATATAACAATTGAgacatatacacaaatatatacacagcataaatatttataaatattatatatacagttatgctatttgtttcatttttaatgtttgttgttttctaaattGCCTTTGAAGATTGTAATaccagtttgttttcttaaagacTGGTGGCGATGTCTGCCTGGGGTGAAATTATGTTGAAATTGTGGGAAACTGGGAGaatctgtgtgagtgtgaagcCTTTAATACCAACAAATAAAGCTATATGTTGAAGCAGAGCCTAGAGTCTATCCAGAAGCATACCTGTGCCAGTGTCCTAGAGTTAGTCCAGATGGGCTTTATTTGGCTGTTATTTGATCCTGCGTGGAAGTCCCCTTCACCGCTGGATGGCTGTGCTATTGTTTATGGCTTGATCCTACCGCCAACCCCAGTTTTAAAGCTCAAAATTCACTGTAATTGTGATACTTTTGGCAGAAACATGTTGTTTGTCCATGTGAATAAATTCAATTACTTAAATctgcatatataaaaacaatctgaaaatgGGAAAACAACCACAAGAAAACCATTGCAGCTGAATTGCATTGAATATGACCATTTTTCCATGATTATTTCACCCTCACGCCTGAAACTACCTTCTCTGTTGTGTGACGCTCACATGCTCAAACAGGTGTGCTTATGGATAGCTAGGCGGACTATTACCTCACAGTGAGGTATGCTTTAGGGTTGAATAAGCTCATTTTTTGATACAATTGGCTGTATCACCATTTAAAGCTTGTCTTAGATAtcactttgttttcttaatgaTCAATAAACTAAATGTAAGCCTATCACCAGAGCATTCGGCAGTCACTCCTCGATGGCCGGGAGTTTCGCTGTGCTGCTCAGGGTGATGTGCGTTCTGTGCAATTTCATAAATGGTCTGTGAATGCGACTTGTGGCCCCAGCTGCTCACTGTCCGCATTATAAGCTACACTAACCTAACAGTTCTGAGTATTGACATGTAGTGACAGTATAAGCTCTTATCCAGATATCTAAAGCATCCTTTGTGTTGTATCTTTATGGGGAATCGGTCTCACATGTATTCTTATTGTTAAACGAATGCTTTGTTATAGTTATGCGTTTTATTATGAAGCCGCATGTCCAGTCGGACACACAACCTGCACACTCTCGATCGCTGTATTATAGCTGCACTTACTTAGGATGTTTATTTCCGTTCCAGTGTGCTTGACTGTTGTGAAAGAACTGAATAATgcaagaaaaatgaataaataaaaaaaacggaTTACTTGAGCAAAATCCGAGCCTCGGCTGGAAAAGTGATCAATCGAGTCCCTTAAGAGTCTTAATCTCCGTGATCTCCTCTAAACTGCCttcaaatgtttcatttttgttaattgttttcttattttttaggGGATTAATTGAAATTGCAGaagtcttttgttgttgttgcaccAAAATGCTAGATCCAAATTGAGGATTATCTCTAgataatatcaatattaataatgatgataattataataagacaAACTGAAGTAAtcagttttttgggggggtacGTACAGAAAGCACACTCTCTTAAGCTCGTTGCAAACCAATCACTTTTCAGACTCTCGGACTGCTTGGTGTGAATGTTTAAAGCTTCATTTCTAACTCTTAGTATTTGCTCTGATTATATCTATGGCAAGAGGaatattattctattatttgtatGAACACATTAATATGTATATGGATGCAGGCAATACATCATAGTACCTGTGTGAAagttaaaaaagcatttaacaCTGGAGAtctatataaaactatatatataaatataaacccaCTCAGAATTACATTGTTATATTATCCCTATTAAAGCAAtgattgtgtaataaaaattgatacattttgtattcaa
>TU26926
AATTTTAAGTGGGCTATTTTATACTCGTTTTCTTAAAGCAGTAGGTATTAATGGTTACAGAATGTGTCTTTGGTATCGTTGTCTGTTTAAGGCTCTTCTCTGGTCATTAATAGTTGAGTCTTATCAGTGGAGTTTAATATCAGCGGCCTCAGGGCTCAGCAGATGCTGTCTTCAAAGCACCTCAACTGGGTAGGCATTATAGCCATTGCTGGTTGTGGGTTAACAGAAATTGCACTACGTTACATTAGTAGACACCTCAAATGGATTTATTTAGTTGAATTGCTCAAAAGGAACCCCATGTCCATATTACAGACTTATTGGGAGAAGAAAAGAGACTTTTTAGGGAGGAGGAAATCCACACAGTTAAGGACTACTTTAGTCTATGAATTAAACCATTTTCCTGTCCTGGTCAGAAGGCTagctaaacaaatacaattttccttttgtgtgtCTCTTGAATGGTTCCTTGTTTTGCCTAAAAGCCTTGGAAATTGAAACGCTTAATTCAGAGAGACATAATCAAACTCAGCAACTCACAATCGGACATGGACAATTGTGTGGAACTAAAGGAGACCAGTACAGGTTAACGCAGGCGCACAAGATGTATGGCGGTTTGAATTGAAAGTGTTCTTTACTCTGTGGAATTTTTCAGGGacgtttttttcccccatcccTGTTCAATGGCTCAGACGTCTTGTGGTTCCTGTAATAGGATTGCAATGGACTCTCGAGCTGATGAAGAAAAACTGACTCGGAACATGTGGTGAAGCGTTTCTTTCTAGTCGTCCACGATTGTTTCTCTGTTGTGCCGGCAGTGTTTGTGGCTTCTGTATGTCAGCTGTAAAACGAGACTGTACATGCAGTGAAAGCTCGAAGGCTGGGTAAATCTAGGtacatctttcattttattttattttctaaaagccATATTTAGTTGTGCCACACAATTAACAGTCAACCAGTTCCCAAATCCTTCAAACGTAAGGAAAAAGTACGGTGCTATTACCCACGTGGGGCGTGCGATTATGATTCACTCTCTGTTGTCTATATGTGGTGTGTTTCAGTTCGTAAGCTTTTCCAAGGTGTCAGCTACAGATCTTGGTAAAAGGTTTTAGATTGTTTTGCAAACTTATGCTGTTTGACCTGCAGGGGTTAGGACTTTAGAGTTAACACGGCTGAACTGGGAATATATACAGAAGCAGCAACTCGCActtatgcttaaaaaaatgtttatgccTTATTGAGTGGTTAGCAGTATTTTTGCTgctaatacaattatatacatatatacagcataCACACTTCTTTTCCTTGTGCACCCCTTTCCTTTAGCCCTTATGACATTATTACATAAGCTACATTTGGTAACCCATTACTACACTTGTACTGAGACggtttggggaaaataaaaggaattCTCTTCACCATTATATTGAATGTGTAAACGGTTACTTCATTTCATGGAGAGCAGCTGTTTGCTGGTCTCCCCCTCCTGCACTAATGGGCATTTTCAGCAGATGTCACTGTGCCACATTGAAATGcatgcacagcaacaacactgCTACCTGCAGCAGTGAGGGAAATGCTTGCACAGGGAAGGCAATTACAGCCGTGCGACTGAGAGCCTCAGGATATGCACACAGTAAAGACCGGGGCGGTGCGATGTCCCGTAACGCTATGCTGAGGTGAAACGTCAGTCCTGCAAAATCCAACAGTGAATTCTGTCGCCCGTGTTTTCTCTCGGTGTGTTTTCTACTGTCTTCTTGGTCACAGACATTAAATGATAGACCTGACTGCTCTTTGCATTGCTGGCTTGGCTGCtaccagagcccagacttgctTGCCAAATCACACTTTCAAAGTTTACTGGAAACAGGCCAGAATAGCTAAGGGTGGGGAGGGActtagtgttttttaaattgctatttTTGTAATCTGTAATCACTTTATGAGGTAACTGATTAAGTACGCAGTTATCATAATCTTAGAAGCACTTAAACTCGAGTACCAATGCAGTAAGCTCCTGGATGGAGAATGAGCGAGTGTGTGTAAGGAAATTAAATCACCTATCTAAATATGACTAGCATAATTTCAGATATAACAATTGAgacatatacacaaatatatacacagcataaatatttataaatattatatatacagttatgctatttgtttcatttttaatgtttgttgttttctaaattGCCTTTGAAGATTGTAATaccagtttgttttcttaaagacTGGTGGCGATGTCTGCCTGGGGTGAAATTATGTTGAAATTGTGGGAAACTGGGAGaatctgtgtgagtgtgaagcCTTTAATACCAACAAATAAAGCTATATGTTGAAGCAGAGCCTAGAGTCTATCCAGAAGCATACCTGTGCCAGTGTCCTAGAGTTAGTCCAGATGGGCTTTATTTGGCTGTTATTTGATCCTGCGTGGAAGTCCCCTTCACCGCTGGATGGCTGTGCTATTGTTTATGGCTTGATCCTACCGCCAACCCCAGTTTTAAAGCTCAAAATTCACTGTAATTGTGATACTTTTGGCAGAAACATGTTGTTTGTCCATGTGAATAAATTCAATTACTTAAATctgcatatataaaaacaatctgaaaatgGGAAAACAACCACAAGAAAACCATTGCAGCTGAATTGCATTGAATATGACCATTTTTCCATGATTATTTCACCCTCACGCCTGAAACTACCTTCTCTGTTGTGTGACGCTCACATGCTCAAACAGGTGTGCTTATGGATAGCTAGGCGGACTATTACCTCACAGTGAGGTATGCTTTAGGGTTGAATAAGCTCATTTTTTGATACAATTGGCTGTATCACCATTTAAAGCTTGTCTTAGATAtcactttgttttcttaatgaTCAATAAACTAAATGTAAGCCTATCACCAGAGCATTCGGCAGTCACTCCTCGATGGCCGGGAGTTTCGCTGTGCTGCTCAGGGTGATGTGCGTTCTGTGCAATTTCATAAATGGTCTGTGAATGCGACTTGTGGCCCCAGCTGCTCACTGTCCGCATTATAAGCTACACTAACCTAACAGTTCTGAGTATTGACATGTAGTGACAGTATAAGCTCTTATCCAGATATCTAAAGCATCCTTTGTGTTGTATCTTTATGGGGAATCGGTCTCACATGTATTCTTATTGTTAAACGAATGCTTTGTTATAGTTATGCGTTTTATTATGAAGCCGCATGTCCAGTCGGACACACAACCTGCACACTCTCGATCGCTGTATTATAGCTGCACTTACTTAGGATGTTTATTTCCGTTCCAGTGTGCTTGACTGTTGTGAAAGAACTGAATAATgcaagaaaaatgaataaataaaaaaaacggaTTACTTGAGCAAAATCCGAGCCTCGGCTGGAAAAGTGATCAATCGAGTCCCTTAAGAGTCTTAATCTCCGTGATCTCCTCTAAACTGCCttcaaatgtttcatttttgttaattgttttcttattttttaggGGATTAATTGAAATTGCAGaagtcttttgttgttgttgcaccAAAATGCTAGATCCAAATTGAGGATTATCTCTAgataatatcaatattaataatgatgataattataataagacaAACTGAAGTAAtcagttttttgggggggtacGTACAGAAAGCACACTCTCTTAAGCTCGTTGCAAACCAATCACTTTTCAGACTCTCGGACTGCTTGGTGTGAATGTTTAAAGCTTCATTTCTAACTCTTAGTATTTGCTCTGATTATATCTATGGCAAGAGGaatattattctattatttgtatGAACACATTAATATGTATATGGATGCAGGCAATACATCATAGTACCTGTGTGAAagttaaaaaagcatttaacaCTGGAGAtctatataaaactatatatataaatataaacccaCTCAGAATTACATTGTTATATTATCCCTATTAAAGCAAtgatt

Function

symbol description
prdm11 Predicted to be involved in regulation of gene expression. Predicted to be active in nucleus. Orthologous to human PRDM11 (PR/SET domain 11).

NR:

description
PREDICTED: zinc finger protein 862-like isoform X3

GO: NA

KEGG:

id description
K24644 PRDM11; PR domain zinc finger protein 11

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007146 True 8133 mRNA 0.47 8 5505005 5523713
TU26926 False 3959 lncRNA 0.39 1 5519723 5523681

Neighbor

gene id symbol gene type direction distance location
AMCG00007142 NA coding upstream 33973 5466057 ~ 5471032 (+)
AMCG00007143 atg13,LOC106587118 coding upstream 39924 5451977 ~ 5465081 (+)
AMCG00007144 NA coding upstream 68311 5423438 ~ 5436694 (+)
AMCG00007141 NA coding upstream 145570 5358539 ~ 5359435 (+)
AMCG00007135 NA coding upstream 397487 5106046 ~ 5107518 (+)
AMCG00007155 ndufs3 coding downstream 158135 5681848 ~ 5685380 (+)
AMCG00007161 NA coding downstream 162483 5686196 ~ 5693066 (+)
AMCG00007159 fnbp4 coding downstream 252517 5776230 ~ 5787911 (+)
AMCG00007164 NA coding downstream 264963 5788676 ~ 5805700 (+)
AMCG00007165 mtch2,LOC106587126 coding downstream 283169 5806882 ~ 5816264 (+)
G21521 NA non-coding upstream 9334 5495349 ~ 5495671 (+)
G21416 NA non-coding upstream 456322 5044629 ~ 5048683 (+)
G21292 NA non-coding upstream 1129657 4375136 ~ 4375348 (+)
G21252 NA non-coding upstream 1223856 4280924 ~ 4281149 (+)
G21251 NA non-coding upstream 1224375 4280423 ~ 4280630 (+)
G21585 NA non-coding downstream 224227 5747940 ~ 5752925 (+)
G21683 NA non-coding downstream 555030 6078743 ~ 6125287 (+)
G21713 NA non-coding downstream 632906 6156619 ~ 6158951 (+)
G21715 NA non-coding downstream 685122 6208835 ~ 6209270 (+)
G21749 NA non-coding downstream 1023967 6547680 ~ 6547886 (+)
AMCG00007134 NA other upstream 461832 5034707 ~ 5043173 (+)
G21411 NA other upstream 550724 4942690 ~ 4954281 (+)
G21400 NA other upstream 584203 4918366 ~ 4920802 (+)
AMCG00007118 NA other upstream 1046701 4454873 ~ 4458304 (+)
AMCG00007104 shank2,LOC108440598 other upstream 1405396 4076080 ~ 4099609 (+)
AMCG00007147 fbxo3 other downstream 28680 5552393 ~ 5562154 (+)
AMCG00007148 NA other downstream 42228 5565941 ~ 5580294 (+)
AMCG00007154 ptpmt1,LOC102795413 other downstream 144483 5668196 ~ 5672145 (+)
AMCG00007160 NA other downstream 233964 5757677 ~ 5775456 (+)
AMCG00007196 svip other downstream 1687851 7211564 ~ 7218475 (+)

Expression

AMCG00007146(prdm11,LOC106560765,LOC105018678) Expression in all Baseline Samples

Bar chart with 16 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
End of interactive chart.

AMCG00007146(prdm11,LOC106560765,LOC105018678) Expression in each Bioproject

Bar chart with 7 bars.
AMCG00007146(prdm11,LOC106560765,LOC105018678) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 50.
End of interactive chart.

Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_024472 prdm11 coding NC_007136.7 CM002909.2 7692075 ~ 7709797 (-)
grasscarp (Ctenopharyngodon idella) CI01000184_00446534_00453938 PRDM11 coding CI01000184 null 446534 ~ 453974 (+)