AMCG00007157 (kbtbd4,LOC107738697,LOC107686314)


Basic Information

Item Value
gene id AMCG00007157
gene name kbtbd4,LOC107738697,LOC107686314
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 5674177 ~ 5677569 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007157
ATGGAGTCCAGCGAGGATGCGGGGGTGCTGAACGTGGGGGGCTCGTCTGGCGAGGAGAACTACTTCCTGGGCTACACCTTCACCGACCGCTCGCACTCCAGCCGCGTGGTCAAGAGCATCATGGACCTGTGCCTGGAGGACGGGCTGTTCGCCGATGTCACGGTGATGGTGGACGGCAAGGAGTTCCAGCTCCACCGACTGGTCCTGTCGGCCCAGAGCTGCTTCTTCCGGTCTATGTTCACCTCCAACCTGAAGGAGGCACACAACCGCAGCATCGAGCTGAAGGACGTCAGCGCCCGCGTCTTCCAACTGCTCGTGGACTACATCTACCACGGCACCATCAAGCTCAGGGTGGAGGACCTGCAGGACACCTACGAGATGGCCGACATGTACCAGCTGACCGCCCTGTTCGAGGAGTGCTCCCGGTTCCTGTCGCGCACCGTGGCCGTCAGGAACTGCCTGCAGGTGATGTGGCTGGCTGACCAGCACAGCGACCAGGAGCTGTACACCTCGGCCAAGCACTGCGCCAAGATCCACCTGGTCCAGCTGCACCAGACTGAGGAGTTTCTCAACCTGCCCCTGCGGCTGCTCGTGGACATCATCAAAGACGGAGTCCCCAGCTCCCAGAACCCGACGGCGGCCATCGACTCGTGGGTGAACCACAAAAAGGACGAGCGGGGGGCGCACTCGGGGATGCTGCAGGACAGCCTGAAGGAGATCGGCGAGAATGTGCACATCTACCTGATCGGCAAGGAGGAGACGCGCACGCACTCCCTGGCCGTGTCCCTGCACTGCGACGAGGACGACGCCATCAGCGTGAGCGGCCAGAACAGCCTGTGCCACCAGATCACGGCGGCCTGCAAGCACGGCGGCGACCTGTACGTGGTGGGCGGTTCGATCCCGCGGCGCATGTGGAAGTGCAACATGCACACCATGGACTGGGAGCGCTGCGCCCCGCTGCCCCGCGACCGGCTGCAGCACACGCTGGTCTCCGTGCCGGGTGAGGACGCCATCTACTCGCTGGGCGGCAAGACGCTGCAGGACACGCTGTCCAACGCCGTCATCTACTACACCGTCCGGGACAACATGTGGACCGAGACCAGCCAGCTGGACACGGCTGTCTCCGGGGCGGCGGGCGTCAACCTGGGCGGCACCATCTATCTGCTGGGCGGCGAGGAGAACGACATGGACTTCTTCACGAAGCCCTCGCGCATCATCCAGTGCTTCGACACGGCCGCGCAGAAGTGCCACACCAAAGCCTACATGCTGCCGTTCGCCGGGTGCATGCACGCCACGGCGCACAAGGACCTCATCTTCGTCGTGGCCGAGGGCGACTCGCTGGTCTGCTACAACCCGCTGCTGGACAGCTTCACGCGACTGCGCTTCCCCGAGGCCTGGAGCTGCGTGCCCTCGCTGTGGAAGGTGGCCAGCTGCAACGGCTGCATCTACGTCTTCAGGGACAAGTGCAAGAAGGGCGACGCCAACACGCTGAAGTTCGACCCGGCCACCTCGGTGGTATCCGTCATCAAGGGCATCAAGATCCTGCTGACGAACTGGCAGTTTGTTCTGGCCTGA

Function

symbol description
kbtbd4 Orthologous to human KBTBD4 (kelch repeat and BTB domain containing 4).

NR:

description
PREDICTED: kelch repeat and BTB domain-containing protein 4-like

GO: NA

KEGG:

id description
K10472 KBTBD4; kelch repeat and BTB domain-containing protein 4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007157 True 1575 mRNA 0.64 4 5674177 5677569

Neighbor

gene id symbol gene type direction distance location
AMCG00007158 celf1,LOC106561939 coding downstream 45805 5613748 ~ 5628372 (-)
AMCG00007156 rapsn coding downstream 68309 5592874 ~ 5605868 (-)
AMCG00007150 NA coding downstream 85948 5580784 ~ 5588229 (-)
AMCG00007152 NA coding downstream 121866 5526982 ~ 5552311 (-)
AMCG00007151 NA coding downstream 172380 5496948 ~ 5501797 (-)
AMCG00007162 NA coding upstream 14573 5692142 ~ 5693305 (-)
AMCG00007163 NA coding upstream 57105 5734674 ~ 5752971 (-)
AMCG00007167 LOC106587439,LOC106587479,LOC104919254 coding upstream 149056 5826625 ~ 5841867 (-)
AMCG00007168 LOC103364365,LOC108229046,LOC101064922 coding upstream 181282 5858851 ~ 5859267 (-)
AMCG00007170 NA coding upstream 195207 5872776 ~ 5896585 (-)
G21550 NA non-coding downstream 111969 5559594 ~ 5562208 (-)
G21536 NA non-coding downstream 150500 5521615 ~ 5523677 (-)
G21537 prdm11,LOC106560765 non-coding downstream 155426 5517227 ~ 5518751 (-)
G21535 NA non-coding downstream 158206 5514986 ~ 5515971 (-)
G21522 NA non-coding downstream 178442 5495349 ~ 5495735 (-)
G21582 NA non-coding upstream 43694 5721263 ~ 5721542 (-)
G21646 NA non-coding upstream 237503 5915072 ~ 5988322 (-)
G21722 NA non-coding upstream 663210 6340779 ~ 6341171 (-)
G21739 NA non-coding upstream 841554 6519123 ~ 6519736 (-)
G21756 NA non-coding upstream 888648 6566217 ~ 6569739 (-)
G21429 NA other downstream 616771 5056787 ~ 5057406 (-)
G21426 NA other downstream 624657 5041659 ~ 5049520 (-)
AMCG00007091 ckap5,LOC108269026 other downstream 2173507 3476068 ~ 3500670 (-)
AMCG00007072 NA other downstream 3010528 2644905 ~ 2663649 (-)
AMCG00007059 NA other downstream 3477322 2142675 ~ 2196855 (-)
G21632 psmc3,prs6a,LOC107758446 other upstream 139240 5816809 ~ 5820284 (-)
AMCG00007173 madd other upstream 330071 6007640 ~ 6054064 (-)
AMCG00007201 NA other upstream 1646855 7324424 ~ 7342341 (-)
G21942 NA other upstream 1821878 7499447 ~ 7506875 (-)
G22200 NA other upstream 2715627 8393196 ~ 8396224 (-)

Expression


Co-expression Network