AMCG00007163


Basic Information

Item Value
gene id AMCG00007163
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 5734674 ~ 5752971 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007163
GATGTATGCAACTCTGGATACTTCTCCTTTTGCACAAACCTGAGGAATGggttctgtctgtgtgtctataaAAGTCAGACAGAGGCAGGAGTCAAGCCCAGGAACCCGGAGCCATGAGGTCTGCGATTGTCGTCTCCTTTGCCTATGCACTGCTCACTCTTGTGCACTGCCACCCTGTCAAGTTTTCCTTGAATCTGAAGATAGACAATGATGACCGCCAAGATCGATCTTCACGTCACACAGGCAACAGTACAGATGATGAAGCTTTTGATGTCTCGACGTTGATTGAGAAAGCCAATGAGAACCTGGCACAAGACCCCGATGGTCCACTCGTTCTGTTCGGGGACATTGCCATGGATCTGGGCTTCGGCAACGCCGACCCCTGTACCTCTCGGAATTGCAAATGGAAGAAGGGTTCAGATGGGAGAGTACATGTCCCCTATGTCATCTCCTCGGCATACTCTGCGAGAGAGCACAGTATCATCGAGTCGGCCCTGCAATCATTCTTTTACTCCACCTGCATCCAGTTCGAGAGGCGCAATCAGCACGAGGACTACCTATCCATCGAATCCCGCTCCGGGTGCTATTCCTTCGTAGGCCGGCGGGGGGGGCGACAGGTTGTGTCCCTACAGCGAGGCGGATGCGTTTTTCATCATACGCGCAGCGACCGCGACCAACACGTCCGAATCTTATACGAGAACATCATCCGCGGCCAGGAACACAATTTTAACAAGATTAATACCAACAACCTTGGGACTCCGTATGACTACGGCTCTGTAATGCACTATTCGAGGTTTGCCTTCTCCGGCAATGGACGGCCAACAATCGAGCCGATCCCAGACCCCAACGTGTCAATTGGAAGAGCCCGGGAAATGAGCCCGATCGACATTGCGAGGATCAATCGGCTCTATGAATGCAGGAAACTGGAAGCTCTCACGGTGTGTTGTCCTGGATGCACTCATCCCCGTGAGGGAGAAGACCTGGCTAAGAGAGCCATGAGAACGGCAGCAGGGAAAGCGAAAGAGCCCTTTGAagtgtccagtccagtccagtccgaAGTCCTTCCTGCCCCATTCCTCTCTCACGACTGCAGACATGAGGAGGCGAGAACTGGAAATGGATAA

Function

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0008237 metallopeptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007163 True 1124 mRNA 0.53 11 5734674 5752971

Neighbor

gene id symbol gene type direction distance location
AMCG00007162 NA coding downstream 41369 5692142 ~ 5693305 (-)
AMCG00007157 kbtbd4,LOC107738697,LOC107686314 coding downstream 57105 5674177 ~ 5677569 (-)
AMCG00007158 celf1,LOC106561939 coding downstream 106302 5613748 ~ 5628372 (-)
AMCG00007156 rapsn coding downstream 128806 5592874 ~ 5605868 (-)
AMCG00007150 NA coding downstream 146445 5580784 ~ 5588229 (-)
AMCG00007167 LOC106587439,LOC106587479,LOC104919254 coding upstream 73654 5826625 ~ 5841867 (-)
AMCG00007168 LOC103364365,LOC108229046,LOC101064922 coding upstream 105880 5858851 ~ 5859267 (-)
AMCG00007170 NA coding upstream 119805 5872776 ~ 5896585 (-)
AMCG00007172 nr1h3,LOC107553099,LOC107689968,LOC107664377 coding upstream 328564 6081535 ~ 6088041 (-)
AMCG00007176 NA coding upstream 368731 6121702 ~ 6122376 (-)
G21582 NA non-coding downstream 13132 5721263 ~ 5721542 (-)
G21550 NA non-coding downstream 172466 5559594 ~ 5562208 (-)
G21536 NA non-coding downstream 210997 5521615 ~ 5523677 (-)
G21537 prdm11,LOC106560765 non-coding downstream 215923 5517227 ~ 5518751 (-)
G21535 NA non-coding downstream 218703 5514986 ~ 5515971 (-)
G21646 NA non-coding upstream 162101 5915072 ~ 5988322 (-)
G21722 NA non-coding upstream 587808 6340779 ~ 6341171 (-)
G21739 NA non-coding upstream 766152 6519123 ~ 6519736 (-)
G21756 NA non-coding upstream 813246 6566217 ~ 6569739 (-)
G21786 NA non-coding upstream 882612 6635583 ~ 6638309 (-)
G21429 NA other downstream 677268 5056787 ~ 5057406 (-)
G21426 NA other downstream 685154 5041659 ~ 5049520 (-)
AMCG00007091 ckap5,LOC108269026 other downstream 2234004 3476068 ~ 3500670 (-)
AMCG00007072 NA other downstream 3071025 2644905 ~ 2663649 (-)
AMCG00007059 NA other downstream 3537819 2142675 ~ 2196855 (-)
G21632 psmc3,prs6a,LOC107758446 other upstream 63838 5816809 ~ 5820284 (-)
AMCG00007173 madd other upstream 254669 6007640 ~ 6054064 (-)
AMCG00007201 NA other upstream 1571453 7324424 ~ 7342341 (-)
G21942 NA other upstream 1746476 7499447 ~ 7506875 (-)
G22200 NA other upstream 2640225 8393196 ~ 8396224 (-)

Expression


Co-expression Network