AMCG00007165 (mtch2,LOC106587126)


Basic Information

Item Value
gene id AMCG00007165
gene name mtch2,LOC106587126
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 5806882 ~ 5816264 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007165
CGCATCTATATGGCGTCTCCCCTGTCACATGGTCCCCGGGCCGGCCTCGCACCACGTGACGCGAGACCCAGCGCAAAGCCCGGGCAGGTCATGTGACCGCCGCCTGGTTCCCGCAGCCCTCGGAGGAGAGTGTCGTTTCCCATAATGGCGGACACGTGTGGTCAGATAGCGCTGGGCTCGGGGCTCACGGTGCTCTCCCACCCGCTCATGTACATCAAGGTGCTGGTGCAGGTCGGGCATGAACCTCTCCCTCCCACTCTAGGCAGAAACATTTTTGGCCGACAGGTTTACCAACTGCCAGGCCTCTTTGCTTACGCGAAACACATCGTGAAGATCGATGGGAAATCAGGCCTGTTTAAAGGCCTTGCCCCCAGGCTGTGTGCTGGGACCATTGGGACCCTTGTCCACAGTAGTGTACTACAGAGATTCTCGGAAGGAGATAGAAATGAGGAATCAGGGAACGGGAAGAAGGAGGATTGTTCTTCGCTACAGCATGTCGTGAACGAGACAACCAAAGAGATGGTGGCACGCTCCTGCGCCACGATTGTCACGCACCCCTTTCATGaaacAAATCTGATGTTTGATAACCTTTCTCTTCCAGTGATCACTTTAAGATGTATGGTACAATTCATTGGAAGGGAAACCAAATACAGCGGAGTGTTCGACTCGATGGTGACCATCTATAAGGAAGAGGGAATTCTGGGATTTTTTGCGGGTCTGATCCCACGCCTGCTAGGGGACATCTTCTCGCTGTGGATCTGCAACATGCTGGCCCACCTCATCAACACCTACGCGATAGACAGCTCGATGAACCACATGGGAGAGATCAAGAACTGTTTCCAGGCAGTGACCGGGTTCTTCGCCAGTATGGTCACGTACCCCTTTGTGTTGGTGTCCAATGTGATGGCAGTCAATAACTGTGGACTTGCTGGTGGTCTCCCCCCCTACGCGTCCGTATATCCTAACTGGGTCGACTGCTGGAGGCACCTCAGCAGAGAGGGCAACATGAGCAGAGGAAACAGTCTATTTTTCCGGAAGATACCGGCCGGGAAGACATACGCAATGGAACAgaagagatttttttaaagtgatggCGATACAGAATAGTCTActtgtaataatataaagtaaCGTAATGATTGAAATTATGATTctttgtatgcatttgtttacagacaatgtacaatgttgtttttttaaaacaatctgtcaAATCCTGCAACTAGTAAAGAcctttatgcattattttatgaatatgcGAGCTGCTTTCATAAgaataagatttatttttacactttagtTTGTATAGACAACTGAAGGATCTTGTGAGATTTGGATTAATTTAGTCTCGGACACTGACAAACTGAAAGTTGTACCTTTTGTTTCACCTTTGTGTTCATGCCAGGCACCAAGCACTTAATGTCTCTTGTTTTCAGAAACCTCTGGACCGATCAAATGTATAGGCATTAGTCATTTAACAGACATTGGCTCTTTCAGATGTGTGCAGGTTTTCTCTATAAAAAGGGAAATTCATTGTTAATAAGCAGGATTTCCTCTGCTGTGCACTGATAAGTTTTCGGGGGTCTAGGATTTTCAAATTTAAGTGTAAGGTGTTATATACGCCAGTGTAGCGCAATGCTTCGGCCCCTCATCACATATAATCGAGCGGGGTAATGAAATGCGTGGGGACAGATGTGCTCAGGGTGTAGCTTGTGAGGTATTCCTACCAATGACTTGAAACAATAATTGCATCCTCCTGGtgaactgtgtttttgttttgctttacctGAAGGGGCCGAGTGAAAGACAAGGAACTATAATGCTGCCGTAAATAAGCAGTGGTCGCAAGGtggtatttaataaaaatttaaaataaaaataaatctgcagtggtattccataaatataatgtgtatgaaaaacatattcattgACTTGATTTTCTGCCTCTCAATGTGATACCAAAAACGACTCGCCCCCCCACCATGTTTCTAGGAATAGTCAGTGTCGTATAGGTGCTGGGGGTGCTGCATGTTCATCTCGAGTCCCAGCATGCCGGCGGTGAAGCACTGCGTTCTGCTGCCCGGATCCATGTTCTCTCTCTGGTTTGTGATCAAGAACGTCCTGCTGGATGTGCTGGGGCTGAGAGAGTTGATGGCGACTTCATTTATATAggctgaacaaaaatataaatgcaacatgtaaagtgttgatCCAGTGTTTCATGTGCTGAAAGATCCCAGACAttttccatacacacacacagcgtatttctctcacattttgtgcacaaatttgtttacaaccctgttagtgagcatttctcaaAAGAATCCATCCATCTGGTGTGGTATGAAGAAGCTGGTTAAACCACACGAttattacacaggtgcaccttttGTTGGGGACATTAAAAGGCcactaaaatgtgcagttttgtcacaacacaatgccacagatgtctcaagttagGAGGGAATGTGTGATTgtcatgctgactgcaggaatgtctccctcaaaacttgaaaCTCATAGATTAGGACCTAATTAAATTggctgatttccttatatgaagtGTAACTccgtaaaatctttgaaattgttgcatgttgtgtttatttttgttcggtatatattaatttaccaACTTAGTCTTGATGGAAGGGgtacaaaaaggaaatgtattgtgTTCTCTTAAAACACGTGTCCTCTTGAACTTGGTATGGTATCTATACAAATCTCAGGAGTGGTCTGTAGGAATTGGCACATCTACAGTACCATCTCAGCCTATTGCTTTAAAATCAGCACTGAGGCCATATAATTCAAATGGTCtgtgaaaagcatttttaatgtattcatgatCTGCCAATATTCTGGCTACTGACTGGTGGTGGATATAAATTGTTAATTAACCTCACTGTACAAGCAGTCCAGTGGatccacttttttttaataaatctccTGTTTCAAAAACGACA

Function

symbol description
mtch2 Acts upstream of or within digestive tract development; fat cell differentiation; and liver development. Predicted to be integral component of membrane. Predicted to be active in membrane and mitochondrion. Is expressed in several structures, including central nervous system; head; liver; male organism; and pleuroperitoneal region. Orthologous to human MTCH2 (mitochondrial carrier 2).

NR:

description
PREDICTED: mitochondrial carrier homolog 2-like

GO: NA

KEGG:

id description
K17885 MTCH; mitochondrial carrier

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007165 True 2978 mRNA 0.44 13 5806882 5816264
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Neighbor

gene id symbol gene type direction distance location
AMCG00007164 NA coding upstream 1182 5788676 ~ 5805700 (+)
AMCG00007159 fnbp4 coding upstream 18971 5776230 ~ 5787911 (+)
AMCG00007161 NA coding upstream 113816 5686196 ~ 5693066 (+)
AMCG00007155 ndufs3 coding upstream 121502 5681848 ~ 5685380 (+)
AMCG00007142 NA coding upstream 335850 5466057 ~ 5471032 (+)
AMCG00007166 psmc3,prs6a coding downstream 303 5816567 ~ 5823146 (+)
AMCG00007169 NA coding downstream 128831 5945095 ~ 5949337 (+)
AMCG00007171 mybpc3 coding downstream 139571 5955835 ~ 5992991 (+)
AMCG00007175 ck046,LOC107740492,LOC107700465,LOC107663944,LOC107554899,LOC107755038 coding downstream 287020 6103284 ~ 6113197 (+)
AMCG00007174 kcna4 coding downstream 312320 6128584 ~ 6130659 (+)
G21585 NA non-coding upstream 53957 5747940 ~ 5752925 (+)
G21528 NA non-coding upstream 292740 5513794 ~ 5514142 (+)
G21521 NA non-coding upstream 311211 5495349 ~ 5495671 (+)
G21416 NA non-coding upstream 758199 5044629 ~ 5048683 (+)
G21292 NA non-coding upstream 1431534 4375136 ~ 4375348 (+)
G21683 NA non-coding downstream 262479 6078743 ~ 6125287 (+)
G21713 NA non-coding downstream 340355 6156619 ~ 6158951 (+)
G21715 NA non-coding downstream 392571 6208835 ~ 6209270 (+)
G21749 NA non-coding downstream 731416 6547680 ~ 6547886 (+)
G21750 NA non-coding downstream 738234 6554498 ~ 6554861 (+)
AMCG00007160 NA other upstream 31426 5757677 ~ 5775456 (+)
AMCG00007154 ptpmt1,LOC102795413 other upstream 134737 5668196 ~ 5672145 (+)
AMCG00007148 NA other upstream 226588 5565941 ~ 5580294 (+)
AMCG00007147 fbxo3 other upstream 244728 5552393 ~ 5562154 (+)
AMCG00007146 prdm11,LOC106560765,LOC105018678 other upstream 283169 5505005 ~ 5523713 (+)
AMCG00007196 svip other downstream 1395300 7211564 ~ 7218475 (+)
G21891 NA other downstream 1558059 7374323 ~ 7378946 (+)
AMCG00007232 rpl27a,LOC107687759,LOC107726310 other downstream 2331134 8147398 ~ 8183421 (+)
AMCG00007243 rbtn1,lmo1,LOC108713718,LOC107593328,LOC106609843,LOC107725665,LOC107085592 other downstream 2551172 8367436 ~ 8396242 (+)
AMCG00007242 NA other downstream 2614838 8431102 ~ 8451582 (+)

Expression

AMCG00007165(mtch2,LOC106587126) Expression in all Baseline Samples

Bar chart with 16 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 300.
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AMCG00007165(mtch2,LOC106587126) Expression in each Bioproject

Bar chart with 7 bars.
AMCG00007165(mtch2,LOC106587126) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 600.
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Co-expression Network