AMCG00007191


Basic Information

Item Value
gene id AMCG00007191
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 6927600 ~ 6943044 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007191
AGATATTGACCGTACACCTTCGGCTCAGTTATAACGCGAATTCCCATTACTTGTTCACAGGACATCCCTAAAATTTTGAAGATTGTCACAACAAAAGCAGCCTCTTCGAACGCGGCGGCGATGAAGAAAGATAACGTGGAAGTTAAGGAGTGCCAGACACAAGAGAAAGCCCCAAGAGACAAGAACGACGTTCTAAAGTCGACAGaagaggacaaaaaaaaactggacaGCAGTGACAACAAAAAGACGAGTGAAGGAGTGTGACTGGAGactggggggggaggggggtcttaacggaaaaataaaaccctgaaaaagatgaaaacaatCCAATTGTAAATACTCTGAGGACTTGCGTTTGAACTTTCTGTATGCTATGATGTCATTTTCGCTCAGTCGAATCTCAAGGCATGCCTCCCTCAcgctcatacacacacacacgcagataAACATGCACACGCACTCACAACTCGCCGCTGACAAACTTCACGTTTCATGGAAAGGGGATCCCCTGGTGAAATGAAATATACCGCAGAGGCATGCATTCTAACTCGCTCTGTTttccttcattcattcacagttttctttttcctgttttattttctttgcaaccAAAATATCACTGTGTCATTTGAAACCAAGTGTCTGAAATTGATCGGATACGTGCAGCGATTCCTAGTGAGTCTCCACTTCACAGCTCTTAGGAGACACGAAAACCCTGCAATGTTGtcgttttctgtttgtttgtttattagttttttccatgtcacactTTCCTTACGGAGGAAGGTATGAAAGATACTTCAGATACCTGTTGGATTAATTCTTGCCTGTATATGCTGTAGAGTAGTCGATTTCAGTGTAGGAACAATGTAATCAAGTCCTGACGCAGGAAAGTGTCGATGTATGAACTCTGTGTTATGGTTGCTGTGCAGTAACTGCGACCTCCTTGCGTAGTTATTATATCAATGGGAAAGACTTGTCTGTGGAGAGGATGGACATCTCTAGATCATCCATCACTCGAAATCAAAACCTCGTCTGTTGCAAATAACATAAAACGTAAACATGCTTGATGTTGGCTTCTCGTTTGACTCTGGTGTCTGGCTTCTCACCCCCGGGGAAGACAGACACCAGAATAGGGGCTTTGCGTCTCCGAGTGACAGACGGATTGAGGTTTTGACTTAATCCGGGCCTAAGCCAGTCGTTTTTGGAGCTTGCGGGGCATATGCACTCCTAGACTGAATATTCAACGTCAACTCTTAGTCCTTACCGTGAACATGACAACCCAGACAAGAATGATGGtacaaatacagttttcaaATCTATTAAACTCATTAACTCTTTCCCTTTTGTTAAGACAACAGACTTTTAAATCGCTACCACCTTTAAATTGCTACCATGCTAGTTCCAGGCTTTGTGTGCCATCAATAATGTGCACACCTCCGTGTCTAAAGATGTGGACTGCATCCTTGAGCGATGCTTCTCTTTGGTGCAGCCCGGCTCCTCTGGCTGCCGAGAAGTAATGGCTTTAATCCTTTGGCGTATTTCATTTGCAGGAGCTTATTCGTACTGTCAGACGTGAAGACATCTAGAGGAGCATATCATAGCGTCCCGAAATATCACCAATGGCCTCGGCCCCACGGTGCAGCAAGGTCACAGTTTCACAGCTTTGTGAGGCTCTGATTTCACTCGGAAAGTTCACTGCTTCTCGGTTTAACCCGCCGTTGCGAATCTCCCGGGTGGGAACGGTTTCTCTTCCCAATCCTGAGCTTTTATCTGTCTGTCAGAGAGGCTGGAGACAAAGGTCCTGTTCTCGGTGGCTCTGGAGCAGTGTCTACGCCGTAGTTAAAACACTAGTAGAGAAAATCATGTTTTAGGTGactaattattattgctatCATGATGTTACCATCAGCCCTGTTTCCTGTGATTTCTTTTGCCTGCAGTATGAGCTGCATTAATAAGTAACTACAGCTTCCCTTAGTACTTTTCACAAGGCTGAAGTTGTCCCTGGGgaccaaattaaattacacaacaAACATACTGCAGATACTCCAAACAGCCACACGTCCTCATACGTTTTAATTAACTTCCTTCATtcaaataatcataacaataacaataatactaataataataaaggagcaattacaattaaaggcaattaaaaaaagggCAAAGGCGAGAatctattgtattttttatttgtttatttgatgaCTTGATCCATCCattaagaatacatttgaataaattaaaggaagagggggggaaaaaagctacAGACTTCAAAGCTCGCTAACTGCATGTTTGGAGGGTCATGTCAGTGTGAGGCACTTAAATACAGATTTGTGAATGTCAGGCCGAACAACGTCGAAGCCGGTGATGAAAATGTACCTTTTCAATTCCCTCATGGGACAGGAAAGGTGACATTCATGCTAATCTGTGTATGATTCTGTACTATACAATACTGAAACCCTGTGTTGATTtcctttgaattaaaaataaaccagtagcagaattatttaaaatatgttatgtaTATGGAAAAGATAGAAAGAACACAAGCACACTGCTGTAAAGGTTTTTATCTCTCTGATTCTGGATATACAATTTAAAGCTTGTACCGGCGAACAGCGTGAGTAGCGAACACTGTTTAAGATGTCCTCCCAATTATCTTTAAAACAGAGCCGCGTGACACACCAGAACACGCACACGAAAATCACATCGTTAACTCGGAAAGCATTTCTGTACATAGCATTATAACCGTGGTATCGCACTGTTCTCTCACACGTGTTGGCCAGTAGACTTCTCTGCGCTTCTTTCTCTGTAAATGAACATGTTGCCCcgtgtgttttttaaaagcaataatttaaaagtacaaaaaacaaaaacaaaaaaacataaaaagtgtgCGTTTTTATAATTCAATTTGTAATATGACTCTTGCAAGCTGGAGTTAGAGGACTGGTGGTGTGGATTAATGGGCTGTGTGGGATACCTGACaatcaattttttatttgtgatttgttagaaatttgtattattcctgtttttggggGCGTTGGTTGTTTAATGACAGATGATGGCATTATTATGAGTCCATTATAGCGTCAGAGCTCTTACTGTAGAAGAGGTGCCCCCTTACTTTTGGATAACAGACCCTAATGgtctgtttttactttaaaatattctgtCCACTCTTCCGGATCACCCACAATTAATACCCCATGCAGATGTTTTCATCACACCTGGGAATCTGCCTGTATAGGAGTGTCCCATTCTTTTTTCCTATATATGTCATTTTAAGTGACTTGTGTTGATTGAtcgctttgtgtgtttgtttttttctcactttttatttgtatttatgtttcatcGAATCATTAATTCAAGGAGAATGTAACGAGCTTTGCTTTGATGGCACTTGCATGGTGAATGagatattgtattcatttatgtgtTTTACTTAATCACTTGTTATTAAATGAACGCACCCCAGGCGCACTCTTAAAGGAAGGCACAGAGCTGCGTCTCGTATAACTCTGCGCTGAGACAATTGcatttgtatgtaatttaatCCCACTCGGAAATCAGATCCTTCTTGCAGACGCTGTGGTCGAGCGCAGTTTCCCGCAGAATGTTTCAATCTGGTTGTAAATGTTCAACGAGTGTTCTAATCATACTCTAAACATTTTACTCGCGCCAAAGGTGAGATAACCCGTCTGCCTCTTGGGTTTTTTACGTGGGCCGTGTTTGCTTTACTGTGAAAGAGCAGCTGTCAATCCGACGACCTGCAGATGAAGCAGAAATCTGCCGCGCGTTTAGTTCCCACGAGGCCGTCACAGGAGAAGGCCGGACAGGCtggttcacacacacagagagtgGCGACACGAGACAATGGATGTATGTGACATCCATTGTTGCTCTCTTTTGAACACGCACGGCAGGATCATTGATGTCTGCATGTAAAGCGCGGGTTTACATGTAGAGGTGGCCTCGGGTTTCCTCTGTTCTCCTAATTGTTCTGTCAAACTGTCATCAttctcttgtgtttttgtgatcGACTCTGCCCTTGCATGTGGccgttgtttgtttgtttgtttgtctgtgcaTTATTGGACACAAAGCTGATTCTCCCGACCagaacacgcacacgcacacacacacgcacacgcatccCCACGgcataaatcaaaacatcacGTCTAAACCCCCATCAGAAGTTTCGACCTTCACAACGGCACTTTctagttttctttctctcacagCTGGGCTGCCAATTACACCTGAACCCCACCGATGATGCCCTTAAGCAGTTTGTTTGTCagctgcacaaaataaatagggGGGTGAAGCAAACGGGGCTGTCAATTAAGTtacagagctcagctggaaagGGAAAACTCCCCGGCACAGGTGTCATGTGACGCGCAGGGTTTCGAGACCCCTTTTCGGGAACGGAAAACATCACAGTATCTCCTAATTGCTGTACTAGAGGACCTGACTTTACGGACCTAATTAGACACAGAATGGTCCGCTGTGACAGCCAAGCCCCCCAGCAGGCGGCGCACACCGGTCTGACTTAACTACGAATGTCAGAAGGCATGTGTCACCACCAGCGGAGGAGACCAAAGGCCACACACGGCATCCTGTCACACATCTCCCATAGAAGGAGTTTTGTGATCCACACCTCCTCCTGATTTGCTCCCGTTGCTTCTTTAACTCGGCGCTCGGAGAAGCTGGCGGGTCGGTCGGCCGCGGTGAGGGTGTCAGACACTAACACCTGTATCCTTGCTGCCTCGCCTGAGGGGTGCCGATATCCTCGCTTTCATCCCACCAGTTTATCCCCCAAATTCAAGCGTCATGATGGTCTGAAATTCTGGTGGTTTTAATTTGCGTTTGAATGGGTTTGAGAGTTTGAAGTGATATACTCCATAGCATAACAAGGACGTATGCTTGGGGACTTCAACACCTGTATACAGATAGACCGGATGGATATCTTGGTTAAAATTGTACGGTTctctaaaaaaatgtaaacccaGAAGTCTCTGGGGCCCAGGGACATTTCATCCCTCCGTCCTGCAGTGTGGGTTTGAGACTGCAGAGCTGTAGTATCTGGGAGTCCTGCTTAACCTTGAAATGAAGAGACGGTAGCGCTGTCCTCTTGATTGTGATTTTTACGCCACTTTGGCTTTTTATACGTGGTCCGTTTTCCATGCATAGACTTGCTCTAGTTGCTCATATTTCGGTATGTCTACGCTTAAGCTGTCGCCGCATTACAGTTATGAAGGCATTGATGagtttaattattacaattctGATCAGTGCATATTTGAAGAAGTTAAACAGGAAATGTTCAATGAACTGCTTTTgttgatggtggtggtgattTGTTTCGCCTAAaggtttttgttcttttcacatttgtgttgtgttttgctcTTTTACCCCCGTCGCTCTTTTATTCCACTACATTTATAAGGTAGATCAGTTGTGTACATTTGCAATGTTATAGGTCCTGTTTGTATGATATGATCACACAATGCACAATACACAAAGCATATGTCATGCTATTGAATTGCAGTGTAATGACAGACATTTTAACAGCGATTCCATCCCAAGAACTCAGTGACAATGGGTTGTGTGACCTTACCTGTGTCTGATACCGTGGTTCAGCCGTGCTTCTACCACCTGTGTCTCGCATTAAACTGAAATAGATTTACATTACAATGCTGACAGAGACGAAAGCTAAAGCTAACAACAACATTgggatctttttttattttattttacttttatcgTTTTGTCATCTTGTAAAGTACAGGTAATACTGGCAGATCTAACTACGAAGAATTTTTGGAGTCTcctttttttccagtttaagGGGGTTGTAAAGTTTTAGACCTTAGGGAAGTTTGTTTACTGCTTGTTCTGAATTgaatttattgtatattgtccttctgaaataaatactttggaGAATA

Function

GO:

id name namespace
GO:0006814 sodium ion transport biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007191 True 5987 mRNA 0.43 2 6927600 6943044

Neighbor

gene id symbol gene type direction distance location
AMCG00007190 NA coding downstream 149050 6764224 ~ 6778550 (-)
AMCG00007189 ano3 coding downstream 171017 6741697 ~ 6756583 (-)
AMCG00007188 fibin,LOC103373419,LOC104955317,LOC107740499,LOC107553104 coding downstream 237400 6689580 ~ 6690200 (-)
AMCG00007184 NA coding downstream 250619 6675666 ~ 6676981 (-)
AMCG00007185 bbox1,LOC106587091,LOC106561934,LOC107682871 coding downstream 267338 6655413 ~ 6660262 (-)
AMCG00007192 NA coding upstream 18686 6961730 ~ 6967694 (-)
AMCG00007193 luzp2,LOC102789607,LOC106587094 coding upstream 36907 6979951 ~ 6987935 (-)
AMCG00007197 NA coding upstream 279307 7222351 ~ 7245987 (-)
AMCG00007199 LOC103364363,LOC106926867,LOC102197626,LOC100704341,LOC102233801,LOC101482485,LOC108430810,LOC103139413 coding upstream 340679 7283723 ~ 7307598 (-)
AMCG00007200 NA coding upstream 366712 7309756 ~ 7317222 (-)
G21807 NA non-coding downstream 222938 6704409 ~ 6704662 (-)
G21803 NA non-coding downstream 238491 6687484 ~ 6689109 (-)
G21787 NA non-coding downstream 282722 6638997 ~ 6644878 (-)
G21786 NA non-coding downstream 289291 6635583 ~ 6638309 (-)
G21756 NA non-coding downstream 357861 6566217 ~ 6569739 (-)
G22057 NA non-coding upstream 810370 7753414 ~ 7753697 (-)
G22077 NA non-coding upstream 957758 7900802 ~ 7901175 (-)
G22111 NA non-coding upstream 970560 7913604 ~ 7984510 (-)
G22191 NA non-coding upstream 1308983 8252027 ~ 8252664 (-)
G22193 NA non-coding upstream 1310849 8253893 ~ 8254667 (-)
AMCG00007173 madd other downstream 873536 6007640 ~ 6054064 (-)
G21632 psmc3,prs6a,LOC107758446 other downstream 1107316 5816809 ~ 5820284 (-)
G21429 NA other downstream 1870194 5056787 ~ 5057406 (-)
G21426 NA other downstream 1878080 5041659 ~ 5049520 (-)
AMCG00007091 ckap5,LOC108269026 other downstream 3426930 3476068 ~ 3500670 (-)
AMCG00007201 NA other upstream 381380 7324424 ~ 7342341 (-)
G21942 NA other upstream 556403 7499447 ~ 7506875 (-)
G22200 NA other upstream 1450152 8393196 ~ 8396224 (-)
AMCG00007267 NA other upstream 2514444 9457488 ~ 9463337 (-)
AMCG00007282 NA other upstream 3017018 9960062 ~ 10001165 (-)

Expression


Co-expression Network