AMCG00007192


Basic Information

Item Value
gene id AMCG00007192
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 6961730 ~ 6967694 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007192
TCAAAAAAAATCCAGGCTCAACTGAAAGAGCTACGCTATGGCAAAAAGGATTTGATTTTTAAGGGACAACAACTCACTGACCTGGAGCGCAAGCTGACAGCTGCGAAGGAGGAGTTGGAAAAGGCTGCTCTCGACAAGGAGTCACAGCTGAAGGCTCTGAAGGAGACCGTACATCTCTGTCTGTCGTCAGTTCTGCACAATCAGCCTCCCACCGCGCATCTAATCCCTTCGAAGCAGTCGCAGACGCTGACGTACCCCCTCGCCAACAGCTCCAGAGTGACGTTCCAGCAGCCGCACGCCAAG

Function

GO:

id name namespace
GO:0045202 synapse cellular_component

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04742 Taste transduction

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007192 True 303 mRNA 0.53 3 6961730 6967694

Neighbor

gene id symbol gene type direction distance location
AMCG00007191 NA coding downstream 18686 6927600 ~ 6943044 (-)
AMCG00007190 NA coding downstream 183180 6764224 ~ 6778550 (-)
AMCG00007189 ano3 coding downstream 205147 6741697 ~ 6756583 (-)
AMCG00007188 fibin,LOC103373419,LOC104955317,LOC107740499,LOC107553104 coding downstream 271530 6689580 ~ 6690200 (-)
AMCG00007184 NA coding downstream 284749 6675666 ~ 6676981 (-)
AMCG00007193 luzp2,LOC102789607,LOC106587094 coding upstream 12257 6979951 ~ 6987935 (-)
AMCG00007197 NA coding upstream 254657 7222351 ~ 7245987 (-)
AMCG00007199 LOC103364363,LOC106926867,LOC102197626,LOC100704341,LOC102233801,LOC101482485,LOC108430810,LOC103139413 coding upstream 316029 7283723 ~ 7307598 (-)
AMCG00007200 NA coding upstream 342062 7309756 ~ 7317222 (-)
AMCG00007202 NA coding upstream 351494 7319188 ~ 7323900 (-)
G21807 NA non-coding downstream 257068 6704409 ~ 6704662 (-)
G21803 NA non-coding downstream 272621 6687484 ~ 6689109 (-)
G21787 NA non-coding downstream 316852 6638997 ~ 6644878 (-)
G21786 NA non-coding downstream 323421 6635583 ~ 6638309 (-)
G21756 NA non-coding downstream 391991 6566217 ~ 6569739 (-)
G22057 NA non-coding upstream 785720 7753414 ~ 7753697 (-)
G22077 NA non-coding upstream 933108 7900802 ~ 7901175 (-)
G22111 NA non-coding upstream 945910 7913604 ~ 7984510 (-)
G22191 NA non-coding upstream 1284333 8252027 ~ 8252664 (-)
G22193 NA non-coding upstream 1286199 8253893 ~ 8254667 (-)
AMCG00007173 madd other downstream 907666 6007640 ~ 6054064 (-)
G21632 psmc3,prs6a,LOC107758446 other downstream 1141446 5816809 ~ 5820284 (-)
G21429 NA other downstream 1904324 5056787 ~ 5057406 (-)
G21426 NA other downstream 1912210 5041659 ~ 5049520 (-)
AMCG00007091 ckap5,LOC108269026 other downstream 3461060 3476068 ~ 3500670 (-)
AMCG00007201 NA other upstream 356730 7324424 ~ 7342341 (-)
G21942 NA other upstream 531753 7499447 ~ 7506875 (-)
G22200 NA other upstream 1425502 8393196 ~ 8396224 (-)
AMCG00007267 NA other upstream 2489794 9457488 ~ 9463337 (-)
AMCG00007282 NA other upstream 2992368 9960062 ~ 10001165 (-)

Expression


Co-expression Network