AMCG00007201


Basic Information

Item Value
gene id AMCG00007201
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 7324424 ~ 7342341 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007201
ATGCGATACTGCGTGCCCAGCGATACACGCTTCGGCCTGGGCAGCAGCTCAGACCGGCCAGACGCCGAGTGGGCTGATGTAATCGTGCAGCCCTGCTCTCCTCCCCCAGTGACTGACGAGACGTGTCCTCCTCGGTGCTGCACCCCCCACGGCCGGTGTGCTGGGGGTGAGCCACCCCTCCCGGGAACCTGGGTCTCTGAGGCCGAGAACATGAAGGAGGAGGTGCTGCCGGAAAGatgctgcctctctctctctgtgttttctgtcgGCTGGcggtgtgtggctgtgtggggTGGGGGCAGGGCCACATTGCGCTGGGGGAATGAATCTCCCCGGGACGCGCCGACCCAGCCAGGCAGTCTAGACTCAGGGGAAGAGACGGAGAATGAGACACAGGCATGCAAAGAGGCCTCCAGCAGACACTCTGCGCTGGGCTTCCTGTTGCAGCTAGGGAGCGGAGCCAACATGGGCCCCCAGGGCAGGAGTGTGCCTGGGTCTCTCTGTCTTGACATTCCTGTGTTTttcccttctcctcctctgcAGATTGACAAGCAGCTCCAGAGCAAGGACTCCGTGTTCTTCAGGGACGGTGTGCGCAGGATTGACTTTGTGCTGTCGTACGTCGACGACAACACCAAGGATGGGGAGAAGAAGCAGGAGAGGAGAAAGGAGTTTGAGAGCAACCTGCAGAAGGCGGGGCTGGAGCTGGAGACGGAGGACAAGTCGGAATCGGAAGACGGAAATACCTACTTCCTGAAGATCCACGCGCCCTGGGAGGTGCTGGCCACCTACGCCGAGGTGCTGAAGATCAAGGTGCCCTTCAAGGCCAACGACATCCCCAACAGCCAGGAGATCCCCCTGGAGTGGCTGTTCAAGCCTTTCCAGCTGGCTGAGGAGGTCATGCACCCCGAGCCCGACTACTTCACCTCGGCCTTCCAGAAGGACAAGCAGGACTTCTTCCTCATCGACAACAAGGACACCTTCTTCCCGGCCTCCACGCGCAACAGGATTGTTTACTACATTCTGTCGCGCTGCCCCTACTGGAAGGAGGACCAGAAGGACAAGAAGGGCATCAAGAGGCTGCTGAGCAACGGCACCTACACCTCCGTCTTCCCCCTGCATGACTGCCGGTACTGGAAGAGGGCCCGGGACCCGGCCTGCGAGAACGAGAGGTACACGCTGTACCGGCAGTGGGCCCGGTTCACCTGCTTCTACAAGGAGCAGCCGCTGAACCTGATCAGGTTACTGGAGAGATTACTGAAGTGTCTCGTGGAGGTTTTCACTGCCCGTGTCTCAGAGGTTTACACTGCCCGTGTCTCGTGGAGGTTTACACTGCCTGTGTCTTCTGTGGGCAGGAAGTACTATGGGGAGAAAATTGGGATCTACTTTGCTTGGCTGGGCTTCTACACAGAGATGCTTCAGGAGATCTGTAATGACGCGGGGAACATCACCATGTGTCCGCTGTGTGATAAGAAATGCAGCTTTTGGATGCTCAACACCACCTGCGAGTCGTCCTGGCACTCACACCTGTTTGACAACGAGGCCACCGTCTTCTTTGCCATCTTCATGGGCATCTGGGTCACGCTGTTTCTGGAGTTCTGGAAGCGGCGCCAGGCCCGGCTGGAGTACGAGTGGGATCTGGTCGACTTcgaggaggagcagcagcagctgcagctgaGGCCGGAGTATGAGACCAAGTGCACCCGCCGCAAACTGAACCGGATCACCCAGGAGGAGGAGTGGGTCCTGGACAGGAGCAGGGTAGACTTCTGGGGGAAAATGGTGATCTGTTGGTCCACGGTCCTACTGTGGGAGCAGGAGCCTTACTTACCCCTAACCAGCAAGTACGCGCGCTACTGCCTGTCCGGAGCCACCGTCCTGTTCTGGGGCACCAAAGAGCTTCGCCTGGTGGGCTCCTTCATGACGCCCCAGATTGCCACCTCGGTCACGGCCTCCTGCATCAATTTTTTCGTCAATTACTACTCCTCCTGCTTCTACGTGGCGTTCTTCAAGGGCAAATTCGTGGGTTACCCCGGCAACTACACCTACATGTTCGGCAAGTTCCGGAATGAGGAGCTGACCACTCAGCTGGTGATTGTGATGGTCGGCAAGCAGGTCTGGGGTAACATCCAGGAAGCTCTAGTGCCgtGGCTGTGGAACTGGTGGGGCAGTCGCAAGGCGCGTGGTCATCCTGAGAGTCTGTACAGCCGCTGGGAGCAGGACCACGACCTGCAGTGCTTCGGACAGCTGGGGCTCTTCTACGAGTACCTGGAGATGGtGATCCAGTTTGGCTTCATCACGCTGTTTGTGGCCTCCTTCCCACTGGCTCCACTCCTGGCTCTCTTCAACAACATCCTGGAGATCCGCGTCGACGCCTGGAAGTTCACCACGCAGTTCCGCCGGCCGGTGGCAGCCAAAGCGCACAGCATCGGAGCGTGGCAGGAGATCCTGAACGGCGTCGCCATCATGTCCGTCGTCACGAACGCCTTCATCGTGTCCTTCACCTCAGACATGATCCCTCGCCTGGTGTATTACTACGCCTACCACCCCGGCAGCGAGCCGTCCATGAACGGCTACATCAACAACAGCCTGTCCGTCTTCGAGATCTCCCGCCTCCCACCGCAGAACATGCCAGACGCTGACGAGAACCCAGAGTGGTTCAACAACACAACCATTACCACCTGCAGgtaCCGTGATTACCGGTACCCCCCCGGCCATGAGAAGGAGTATCAGCACAGCATGCAGTTCTGGCACATTCTGGCAGCCAAACTCgccttcatcatcatcatggaGCACGTGGTGTTCCTGGTGAAGTTCTTCGTGGCGTGGCTGATCCCCGACGTGCCGGCGGACGTGAAGGCCCGGGTGAAGAGGGAGCGCTACCTGACCCAGGACACGGCACGTTGCCACCCGGCTTCCTCGAGGTCTTTCCAATCAATTCACGCATCGCCCGCGAAACAAGGACGCGCTGTAGAGCATGGGGCCGTCCACTGCAGGGGCGGCCGACACGACGCCGAGAACACAGACCGCACCGACGCAGAAACGCCTGAGCTCCAGCCGCtcgctgcttttgttttaatgcaacaCTAA
>TU27417
NNNTCGTGGGGCAGGACTTTATCTCCTTTTTGTGAGCAGCACGGCACGTTGCCACCCGGCTTCCTCGAGGTCTTTCCAATCAATTCACGCATCGCCCGCGAAACAAGGACGCGCTGTAGAGCATGGGGCCGTCCACTGCAGGGGCGGCCGACACGACGCCGAGAACACAGACCGCACCGACGCAGAAACGCCTGAGCTCCAGCCGCtcgctgcttttgttttaatgcaacaCTAAAGTAATCGTTCTTTTCTCTTATtagtggttatatttatttgtattcaacattttatttaaacacacacataatttatATCCCGGGCTGCATGTTGTAAGAGTTGCAGAGTCGGTCCTGCTGGCCGAGCGTGAGGTCTGATCTGTCCTCGACGCGGGGACAAATCAAACCCATCAGGCGGCAAGAGCAGAACCATGGAGCAGCTGAGGCATGGGCTCTCAGGCCCAGGCATTATCAAACGTTTCCACCTACCTGCAGATCGCAAGTGACAATCTTGTCGCCCATTGTGGTTTCATGTCTCGTCAGAACCACTTTCAACAAGTTGTAAATAAAAGCACGATACGGTTACAGGTCTCGGGTAGGTTGAAAACACAGTTGacaggtgtgtgttgtgtgtgtgcagtagaAAAGTGACCGGAGCATCTGAGAGTATCCGATACTGAGTCCAATGTGGACTGGGCCGCAGTAAGACTCTCCATTCGAGACGCACTCGGACCCGAGCACGCCTTGCTTTGCTCCCCCCATTTTTCTGGGGGAAAAGCTCTACCTGAGCTTATATCAGCATTGGAGAAATGCACCCTAAAAGCGATATTCCGCTTTTACACGTTTACCTCAAGTACCATAGAGTAGAGTGCTGGTAGTAGAGCGTCTCCCGCTGCGCTTGTAAACATGTGGATAAATGTTTGTGTTAGAAAGTTAAAGTTGACTGTGTGCTTCGATTGAACCTCCCTGTGCAGGAAGCATTGAATATCCGTATGAAGCATCCAGCTGTTGCCAGGGCTGTACAGATGTGCTCGAGTCCAACGTGCAGCTTGTAGAAAGAGCTCAGTGGAGTTGGGGGGATATAGAGCGTCATTGCAGGAACGGttctctgctttttttgtttttgcttttttattattggtaCTTAATCTCGACTGTTTGTGCGTCGGTTGACTGTTCTCAGTGGTGTAGCGGTGAGGTCATCATGTGTGGATCAGTGTGAGGAAAGGAATGGGCACATGCGTGTCAAACCATGGCGATCAGAAAGGCGTCTCTGTGGTTGCACAGGTGTTGATGCCAGCTGTGATGCGTGTCTGCATTCAGTGCTTTTATTGGATTTAGTGAACCTTAGGAATCCAGATACCCATGTTTTGGGCAGATTACTGTTAATTATAAACACCTGTACGGTGCCTTGTTCGTAATATTTTACAGATGCACAGAAAACACGAGTGCTGGAGCTACAGCCAGGCCCGGCGGTGCAGCAAGTCTCTGCACCCCTCCGTGCTGCTCATTCTGCAGTGTTGTGACTGGACATGGGGCAGGCGGTTATGGGTGCTGAGGGGTGGGTTACTGAGAGACTGCAGAGGGGTCTTGTCACATGAGTGACAAGCAGAGAACCTGGATCTCCAGTGGTGTTCTGTGATGCCAAAGACCCACCCTGACTCCCCGGCTCTGCTCTGTGCCAGCGCTCTGCCGGCCGTGGGAGTCGGACTCGCTGACGAGCGCCAGTGTCGCAGCCGGGCCTCAGTGACGCTGCGCATACGCCACTGTTCAGGCTCAGTCTGCTCTGTGCTTTTATCAGCACGGCGCTCCGCGGACAAATGCTCCTAATGTGCCTGTGTTTGCCCAAGTGTTCGAGTTAATGAAAGCCTGTCATCGGGGGGGGGCTCTCCGTGGCATTACaggcttttcttgttttgttttgtttgcagttaaaaaaagaaacacacacatttatacacatcTAATCTGTTTACTCTTCCAGATGTAAAACAGGACAAAATGAATGTCCTTTCACTTTGCAGAAGCACTTAATGAAAccgtgggggggggttgtgacACACTAGACTTCACTGTTCCCGGCTTTTTAATCATAAACACACTACATATCAGTGTTCACAGGCAGAGAGACGGCAAGACTCGCCATTCCTGTCTGTCCAATATCAGTCTTGCCAGGCTCGTTGTAAATTCTAGTTTCTTAAatgaatgattttatatatatatctatctttCTTTAACAAGCAATCTACTGGTGGTAGACGTCCGTCcattctgttctgtattttgctGTTCCCTCCCGGCCTGAGGTCAGAGTTTAGCTCGGCCGACCCGACAcacattgtgtgttgtgttcctGTCCTACTGACGTGGTTTTCTCGCCCCTCTCCTGTGAAGTGCACGTCTTCTCCAGCACTGCCTTCGGGAGCGCGGTACTGAGAGAACGTTGTGTAGTTCTGTCTAGCTGAGcggtggaaaaaaaatcaaaccaaagaCATTATACTATAGGAGGCAAAGGTGGAGGAACGGTCTTTTATATGATTTCAGCCTCTGGACAAAAGAGGGGCGAGTTTGTACGGCATTACACTTCTTCTAAGCAATCGTTTGCCATTTTCCAATCCCCGTACTAACTTCAGCTATTAATGAAAGCAGCTGCTGTGACTGTGTTTTTTATGAAGCGTCAGAGACCCGGTCCGGTCCACTGACCTCACGGCTGTTAATATATGCAATAGTTCTGACCGGCTGGGTTGGTTTTCCGGACCGTTTGGTAATAAAATGATTTTAGGAACCCGTGTCAGAGATGTCGCACACCTATGCATCGAGGAGCTGCGACTGTTATTGACATTTAAAACGCTCGCGTAAATAGTTCACAGAATATTATGAGACAAAAATCTTATGCCTTAAAGTCTCTGTTTACTGTAATAATAtcggaattattattttttccctattctgtttttatttaaacaaaagggTAATTGTGTCTGAGGTCccactgtgtttttaaaggtcTGATGACTGATCGATTACTGATtcgttattttaaatgttcagattGTTTTCTATATAACCTCAAATCTTTGTTCAAAGCTGGTTTACATTCTGTTGGGTATCGAGTCTTGCCTTAAATGTCGATGTGACTGATGAGAGATTCGGTCAAGTGTAGGACTGAcatcttttgtttatttctctaaaaaatatatatataatttttaaaaaaatgtacgtTTATTCCTAATTGTTTTCACTCTAATGTATGGAATGCACCAGAACCTTTATAATGAATATTGAtgatatggaaaataataaaagtatttgttGAAGAA

Function

GO: NA

KEGG:

id description
ko04976 Bile secretion
ko04974 Protein digestion and absorption
ko04975 Fat digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007201 False 3090 mRNA 0.59 24 7327508 7342341
TU27417 True 3319 lncRNA 0.46 1 7324424 7327742

Neighbor

gene id symbol gene type direction distance location
AMCG00007202 NA coding downstream 524 7319188 ~ 7323900 (-)
AMCG00007200 NA coding downstream 7202 7309756 ~ 7317222 (-)
AMCG00007199 LOC103364363,LOC106926867,LOC102197626,LOC100704341,LOC102233801,LOC101482485,LOC108430810,LOC103139413 coding downstream 16826 7283723 ~ 7307598 (-)
AMCG00007197 NA coding downstream 78437 7222351 ~ 7245987 (-)
AMCG00007193 luzp2,LOC102789607,LOC106587094 coding downstream 336489 6979951 ~ 6987935 (-)
AMCG00007206 NA coding upstream 42079 7384420 ~ 7396801 (-)
AMCG00007205 NA coding upstream 66307 7408648 ~ 7423202 (-)
AMCG00007207 NA coding upstream 86378 7428719 ~ 7429020 (-)
AMCG00007204 NA coding upstream 117984 7460325 ~ 7468151 (-)
AMCG00007211 NA coding upstream 218369 7560710 ~ 7561451 (-)
G21807 NA non-coding downstream 619762 6704409 ~ 6704662 (-)
G21803 NA non-coding downstream 635315 6687484 ~ 6689109 (-)
G21787 NA non-coding downstream 679546 6638997 ~ 6644878 (-)
G21786 NA non-coding downstream 686115 6635583 ~ 6638309 (-)
G21756 NA non-coding downstream 754685 6566217 ~ 6569739 (-)
G22057 NA non-coding upstream 411073 7753414 ~ 7753697 (-)
G22077 NA non-coding upstream 558461 7900802 ~ 7901175 (-)
G22111 NA non-coding upstream 571263 7913604 ~ 7984510 (-)
G22191 NA non-coding upstream 909686 8252027 ~ 8252664 (-)
G22193 NA non-coding upstream 911552 8253893 ~ 8254667 (-)
AMCG00007173 madd other downstream 1270360 6007640 ~ 6054064 (-)
G21632 psmc3,prs6a,LOC107758446 other downstream 1504140 5816809 ~ 5820284 (-)
G21429 NA other downstream 2267018 5056787 ~ 5057406 (-)
G21426 NA other downstream 2274904 5041659 ~ 5049520 (-)
AMCG00007091 ckap5,LOC108269026 other downstream 3823754 3476068 ~ 3500670 (-)
G21942 NA other upstream 157106 7499447 ~ 7506875 (-)
G22200 NA other upstream 1050855 8393196 ~ 8396224 (-)
AMCG00007267 NA other upstream 2115147 9457488 ~ 9463337 (-)
AMCG00007282 NA other upstream 2617721 9960062 ~ 10001165 (-)
AMCG00007299 NA other upstream 2810139 10152480 ~ 10246746 (-)

Expression


Co-expression Network