AMCG00007238


Basic Information

Item Value
gene id AMCG00007238
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 8103488 ~ 8104939 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007238
ATGGAGAGGAGGCAAACCTGGCTGGAATCATCCCTGGTGCGCTCATCCAGACTTGGTCTTGAGGTGTTGCAGCGTGCTCAGAGAAGAAACGTGGAGTGGCCTACAGCAGACCAGAGACTTAGAGAGGAGAACCCTAGGAGGAAGGAACGATATGTGGAGGAGAGTGGCGAGgaggaacaaaaacaaacctgccTGGATGATGCCTTCGATACCATACTGGAGTTCATGGCTCACACTACCCATCAATGCAAGAATTTTTACAAATCGGTGCCACTATATCAGTCTGGTCACTCTGAGGTAAACCATGTATGCAGGTACCACACTCAGGGATTCCCTCATGTTCCCTCAACTCAAAGACTGTACAAAAATCAAGAACCCCGGTCAACAGAGGACTTCCACATCGAAGTGGCTCCAGGAACGTACGCCATCACGGCCGGGGCTCAAGACGCTGACAATCAGACTCGGCTGGTTCGAGTCAAAGCCGGAGAGAGTGTGAACCTCAGCTTTGCTTTGTGACCCGCACAGTGGTGCTGAACTGAGGGCAAGTGCAATAACAAAACCCTGTGTCTGAAAACATGCACTTCCGTAGTTTTTATTTGTACCGTGCAAGTATCATCCTGTTTTTATACAGTTTGCTTTTTAACTTGACAGAAACGTTTAAAGAGATTACTGCTACATCTGACAAGGCCCtgatgttttattatgattattattttttggtggtgttgttCATCAGATGTCTAAATGTATCTCCAATTTGTCTTAACACCTCTctacatcaaataaattata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007238 True 792 mRNA 0.46 4 8103488 8104939

Neighbor

gene id symbol gene type direction distance location
AMCG00007226 ipo7,LOC106587545,LOC106562356 coding downstream 131913 7947714 ~ 7971575 (-)
AMCG00007228 NA coding downstream 156547 7936262 ~ 7946941 (-)
AMCG00007227 wee1,LOC107758614,LOC106587548,LOC107583885,LOC107580369 coding downstream 169189 7928506 ~ 7934299 (-)
AMCG00007229 swap70,swap70b,LOC107686252,LOC107569662,LOC107756911,LOC108423449,LOC107740330,LOC108264467 coding downstream 176119 7902173 ~ 7927369 (-)
AMCG00007221 NA coding downstream 356043 7744536 ~ 7747445 (-)
AMCG00007239 rpl27a,LOC107687759 coding upstream 75619 8180558 ~ 8183186 (-)
AMCG00007240 tub,LOC106587536,LOC106562367,LOC107750543,LOC107754678 coding upstream 338388 8443327 ~ 8466794 (-)
AMCG00007246 rras2,LOC106676223 coding upstream 447158 8552097 ~ 8560440 (-)
AMCG00007247 copb1 coding upstream 498539 8603478 ~ 8617299 (-)
AMCG00007248 psma1,LOC107748950,LOC107687760 coding upstream 515599 8620538 ~ 8626345 (-)
G22111 NA non-coding downstream 118978 7913604 ~ 7984510 (-)
G22077 NA non-coding downstream 202313 7900802 ~ 7901175 (-)
G22057 NA non-coding downstream 349791 7753414 ~ 7753697 (-)
G21807 NA non-coding downstream 1398826 6704409 ~ 6704662 (-)
G21803 NA non-coding downstream 1414379 6687484 ~ 6689109 (-)
G22191 NA non-coding upstream 147088 8252027 ~ 8252664 (-)
G22193 NA non-coding upstream 148954 8253893 ~ 8254667 (-)
G22217 NA non-coding upstream 334913 8439852 ~ 8443144 (-)
G22249 NA non-coding upstream 585259 8690198 ~ 8690751 (-)
G22298 NA non-coding upstream 871178 8976117 ~ 8980818 (-)
G21942 NA other downstream 596613 7499447 ~ 7506875 (-)
AMCG00007201 NA other downstream 761147 7324424 ~ 7342341 (-)
AMCG00007173 madd other downstream 2049424 6007640 ~ 6054064 (-)
G21632 psmc3,prs6a,LOC107758446 other downstream 2283204 5816809 ~ 5820284 (-)
G21429 NA other downstream 3046082 5056787 ~ 5057406 (-)
G22200 NA other upstream 288257 8393196 ~ 8396224 (-)
AMCG00007267 NA other upstream 1352549 9457488 ~ 9463337 (-)
AMCG00007282 NA other upstream 1855123 9960062 ~ 10001165 (-)
AMCG00007299 NA other upstream 2047541 10152480 ~ 10246746 (-)
AMCG00007289 bet1l,LOC107740886 other upstream 2082369 10187308 ~ 10190204 (-)

Expression


Co-expression Network