Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00007244 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 8187419 ~ 8205121 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| K12032 | TRIM66; tripartite motif-containing protein 66 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00007244 | True | 5482 | mRNA | 0.45 | 19 | 8187419 | 8205121 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00007231 | NA | coding | upstream | 85631 | 8098065 ~ 8101788 (+) |
| AMCG00007230 | tmem9b,LOC107700603,LOC107754675,LOC107585953,LOC107750540,LOC107674442 | coding | upstream | 91237 | 8092029 ~ 8096182 (+) |
| AMCG00007237 | NA | coding | upstream | 99985 | 8080173 ~ 8087434 (+) |
| AMCG00007236 | NA | coding | upstream | 107557 | 8073768 ~ 8079862 (+) |
| AMCG00007235 | NA | coding | upstream | 116260 | 8050120 ~ 8071159 (+) |
| AMCG00007245 | rergl,LOC104925113 | coding | downstream | 12457 | 8217578 ~ 8221636 (+) |
| AMCG00007241 | NA | coding | downstream | 37063 | 8242184 ~ 8251819 (+) |
| AMCG00007252 | NA | coding | downstream | 467368 | 8672489 ~ 8687381 (+) |
| AMCG00007250 | insc,LOC106561064 | coding | downstream | 546046 | 8751167 ~ 8762076 (+) |
| AMCG00007251 | insc | coding | downstream | 572848 | 8777969 ~ 8784734 (+) |
| G22076 | NA | non-coding | upstream | 286244 | 7900779 ~ 7901175 (+) |
| G22038 | NA | non-coding | upstream | 482060 | 7705148 ~ 7705359 (+) |
| G22027 | NA | non-coding | upstream | 511542 | 7669719 ~ 7675877 (+) |
| G21985 | NA | non-coding | upstream | 580348 | 7606579 ~ 7607071 (+) |
| G21949 | NA | non-coding | upstream | 655649 | 7531563 ~ 7531770 (+) |
| G22192 | NA | non-coding | downstream | 48772 | 8253893 ~ 8254655 (+) |
| G22204 | NA | non-coding | downstream | 239804 | 8444925 ~ 8445550 (+) |
| G22208 | NA | non-coding | downstream | 244963 | 8450084 ~ 8450494 (+) |
| G22209 | NA | non-coding | downstream | 245646 | 8450767 ~ 8450978 (+) |
| G22211 | NA | non-coding | downstream | 279141 | 8484262 ~ 8484504 (+) |
| AMCG00007232 | rpl27a,LOC107687759,LOC107726310 | other | upstream | 3998 | 8147398 ~ 8183421 (+) |
| G21891 | NA | other | upstream | 808473 | 7374323 ~ 7378946 (+) |
| AMCG00007196 | svip | other | upstream | 968944 | 7211564 ~ 7218475 (+) |
| AMCG00007160 | NA | other | upstream | 2411963 | 5757677 ~ 5775456 (+) |
| AMCG00007154 | ptpmt1,LOC102795413 | other | upstream | 2515274 | 5668196 ~ 5672145 (+) |
| AMCG00007243 | rbtn1,lmo1,LOC108713718,LOC107593328,LOC106609843,LOC107725665,LOC107085592 | other | downstream | 162315 | 8367436 ~ 8396242 (+) |
| AMCG00007242 | NA | other | downstream | 225981 | 8431102 ~ 8451582 (+) |
| AMCG00007253 | calcb,LOC106584617,LOC104951332,LOC107090894,LOC106922915,LOC106950942,LOC103461098 | other | downstream | 492862 | 8697983 ~ 8711311 (+) |
| G22372 | NA | other | downstream | 1231403 | 9436524 ~ 9499728 (+) |
| AMCG00007278 | NA | other | downstream | 1731799 | 9936920 ~ 9965267 (+) |
