AMCG00007260 (plekha7,LOC103378745)


Basic Information

Item Value
gene id AMCG00007260
gene name plekha7,LOC103378745
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 9318180 ~ 9318690 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007260
ATGGCGGCTCCGCTCGGGCGGGATACTTTACCTGAACACTGGTCCTACGGAGTGTGCAAAGATGGCAGggtgtttttcattaaTGATGAGACTCAGAGCACGACCTGGCTGCACCCCCGCACCGGCGAGCCCGTCAACTCGGGCCACATGATTCGCTCAGACCTACCGCGGGGATGGGAAGAAGGTTTCACCGACGAAGGGGGCAGTTATTTCATCAAGTGA

Function

symbol description
plekha7 Enables delta-catenin binding activity. Involved in epithelial cell-cell adhesion; pore complex assembly; and zonula adherens maintenance. Located in several cellular components, including centrosome; nucleoplasm; and zonula adherens. Part of pore complex.

NR:

description
PREDICTED: pleckstrin homology domain-containing family A member 7-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007260 True 222 mRNA 0.57 3 9318180 9318690

Neighbor

gene id symbol gene type direction distance location
AMCG00007261 NA coding downstream 84199 9188611 ~ 9233981 (-)
AMCG00007256 sox6 coding downstream 219574 9091932 ~ 9098606 (-)
AMCG00007255 sox6,LOC107700618,LOC107593388,LOC107754684 coding downstream 306979 8981570 ~ 9011201 (-)
AMCG00007249 LOC105889041 coding downstream 620031 8695461 ~ 8698149 (-)
AMCG00007248 psma1,LOC107748950,LOC107687760 coding downstream 691835 8620538 ~ 8626345 (-)
AMCG00007258 NA coding upstream 12499 9331189 ~ 9335174 (-)
AMCG00007262 rps13,LOC107586033 coding upstream 17037 9335727 ~ 9339155 (-)
AMCG00007259 NA coding upstream 31354 9350044 ~ 9383687 (-)
AMCG00007268 NA coding upstream 92950 9411640 ~ 9426782 (-)
AMCG00007266 nat10 coding upstream 155203 9473893 ~ 9487688 (-)
G22305 NA non-coding downstream 133351 9181018 ~ 9184829 (-)
G22298 NA non-coding downstream 337362 8976117 ~ 8980818 (-)
G22249 NA non-coding downstream 627429 8690198 ~ 8690751 (-)
G22217 NA non-coding downstream 875036 8439852 ~ 8443144 (-)
G22193 NA non-coding downstream 1063513 8253893 ~ 8254667 (-)
G22393 NA non-coding upstream 99078 9417768 ~ 9437269 (-)
G22414 LOC106562319,LOC107683603,LOC107754690,LOC106587508,LOC107750553,LOC107688160 non-coding upstream 280002 9598692 ~ 9599154 (-)
G22415 alx4,LOC107593440,LOC106587508,LOC107688160,LOC107750553,LOC107683603,LOC107754690 non-coding upstream 305876 9624566 ~ 9624878 (-)
G22416 alx4,alx4a,LOC107754690,LOC107593440,LOC107683603,LOC103356993 non-coding upstream 315119 9633809 ~ 9640829 (-)
G22505 NA non-coding upstream 714438 10033128 ~ 10044315 (-)
G22200 NA other downstream 921956 8393196 ~ 8396224 (-)
G21942 NA other downstream 1811305 7499447 ~ 7506875 (-)
AMCG00007201 NA other downstream 1975839 7324424 ~ 7342341 (-)
AMCG00007173 madd other downstream 3264116 6007640 ~ 6054064 (-)
G21632 psmc3,prs6a,LOC107758446 other downstream 3497896 5816809 ~ 5820284 (-)
AMCG00007267 NA other upstream 138798 9457488 ~ 9463337 (-)
AMCG00007282 NA other upstream 641372 9960062 ~ 10001165 (-)
AMCG00007299 NA other upstream 833790 10152480 ~ 10246746 (-)
AMCG00007289 bet1l,LOC107740886 other upstream 868618 10187308 ~ 10190204 (-)
AMCG00007298 NA other upstream 946355 10265045 ~ 10272695 (-)

Expression


Co-expression Network