AMCG00007291


Basic Information

Item Value
gene id AMCG00007291
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 10091313 ~ 10096701 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007291
GACACTCAAACACCTGGAGTATCACCTTCTCACATAGCGTCCACGACCATTACAGTGATTGTGCAGGATGTTGATAACCGCCCACCTTGGTTCCAGCCCTGTCAGCAAATTACTGCTGGTTCTGACCAGGTTTGCCTGAACTCTGGGTATACTGGGAACGTCAAGTTAACCGTTAAAGAGTTGAAACCTGGACCTTTGTATGCCATTGATGGTGATACGGAAATTAAGGAAACTATAGTGTATGAGATTGTGGGTGGAAATGAAGCAGGAATATTTGCAATAGATGCCCAAACTGGAAACATAACAATGTCAAAAGCCACAGACATATCCGGTCCAATAATATTGAACATTATGGCATCCCAGAGCATGAACAGGTATCAGTCAGCATTCACCTCGGTTACCTTCAACGTTGTGTCGAGTAGCCTGAATCCCCCTAAATTTGAACACACACTGTATCAAGGGTTTATATCCAGTGACTCGGAGAGGGGAAGCATGGTGCTGGAGGATGGCTTCAATAACAAACCTCTGAAGGTCATTGCTAAGGATGTTGATTTTAATGATAATGAAGAAGAGTTTATTTTACAGGGTATAAATCCAGATGTGACATATGCAGTCCAGGGCAGCAGTGATTTTACAGTGACTAGAGAAGGTTTCATACTCATCAGCCAGGACCTCACACCTGGCCAGGTGGCTCTTACTGTAACTGCTGAAGACACTATGAATGGAGAACAGGGCTCTACTAAGGTCTCTGTTGAAGTGCTAAAAGGTACCACCACTGCCATGCCCACCACAAATGCCACTGACTTTACAGAGTCTGCCACAACTATTCCCTCAGAAATAACAACTAACTTTTCTTCAGGCACAAGCCAGGTCCCCACTTCAGAGCCCAACCAGACTACCTTGTCCCCCTCCCCCACGCACACAGATGTAATTCAGCATCCAGCAGGTATGTACAGTGCAGAGGAAATGGCTGCAGTTTCAGCCAGTCTTGCAGTGCTGCTGGTTCTATGCATGGTGGTCATTGGCCTGCTGGTATTTCGAATCTATAAAGGAAAGTTGGACTGGAAGAAACTGTCAGAGGCCAGCATTTTCCGGAGCTCTTTTATCCGTGGCTCCAATGCAAAGGAGGATGGGATGCAGTTTGTTAACGGTGGCTACAAGCACGAGGAGGATGATGCCAGCAGTCTGCAGTCTAAGGTTCCCGATGAGGTCGACATCAAATCCAATCTAGAGCATGTAGTGAAAGTCAGTGACGTGCCCTTGCAGAGCCAGGCCGTCCTGCTCAGCGCTGCTCTCGCCTCCGAAGCCTTGGCTGACACCAGCAGCTTGGCCGATTCAGACAAAGCAGACAGTGAGAAAGAGGTGAAGCCCATCCTCACCAAGGAGAGGAGGAATGAAGACGGGTACAAGTCTGTGTGGTTCAAAGAAGACATCGACCCCAATGCCAAAGAGGAGGTTGTGATCATCCCAGATAGCAGAGAGGGGGAGGCTGATGAGGATGAGGAATCCCTGGATGAGGATGATgaggcagaggaggaagagaacaCAGATCCAGAACCATATATTTCCGAAGTCAAGGTATCTTTCGAAGACCCAGAGACAGGGATAGACAAAGACCCCTCAGTCCGCTTCCAAGATCCTGATTCTCTGGTGAAAAAGGAATCTCAATATGATGGCATCCtttaa

Function

GO: NA

KEGG:

id description
K16505 CDHR5, MUCDHL; cadherin-related family member 5

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007291 True 1686 mRNA 0.48 9 10091313 10096701

Neighbor

gene id symbol gene type direction distance location
AMCG00007281 LOC105900426,LOC103035847,LOC108428822 coding downstream 35184 10049181 ~ 10056129 (-)
AMCG00007280 LOC107758757,LOC107549278 coding downstream 54196 10035541 ~ 10037117 (-)
AMCG00007279 NA coding downstream 59630 10025484 ~ 10031683 (-)
AMCG00007283 tnnt3b,LOC105906454,LOC107703302,LOC107742575 coding downstream 148089 9939191 ~ 9943224 (-)
AMCG00007274 ush1c,LOC106561052 coding downstream 299146 9754924 ~ 9792167 (-)
AMCG00007290 NA coding upstream 64751 10161452 ~ 10186176 (-)
AMCG00007294 sirt3 coding upstream 122614 10219315 ~ 10228702 (-)
AMCG00007296 NA coding upstream 151576 10248277 ~ 10260107 (-)
AMCG00007297 NA coding upstream 216890 10313591 ~ 10319631 (-)
AMCG00007295 NA coding upstream 223639 10320340 ~ 10326821 (-)
G22513 NA non-coding downstream 4930 10085760 ~ 10086383 (-)
G22505 NA non-coding downstream 46998 10033128 ~ 10044315 (-)
G22416 alx4,alx4a,LOC107754690,LOC107593440,LOC107683603,LOC103356993 non-coding downstream 450484 9633809 ~ 9640829 (-)
G22415 alx4,LOC107593440,LOC106587508,LOC107688160,LOC107750553,LOC107683603,LOC107754690 non-coding downstream 466435 9624566 ~ 9624878 (-)
G22414 LOC106562319,LOC107683603,LOC107754690,LOC106587508,LOC107750553,LOC107688160 non-coding downstream 492159 9598692 ~ 9599154 (-)
G22619 api5 non-coding upstream 277038 10373739 ~ 10375219 (-)
G22660 NA non-coding upstream 450295 10546996 ~ 10578902 (-)
G22680 clg19h11orf96 non-coding upstream 514488 10611189 ~ 10612988 (-)
G22671 NA non-coding upstream 531647 10628348 ~ 10631934 (-)
G22687 NA non-coding upstream 557473 10654174 ~ 10655530 (-)
AMCG00007282 NA other downstream 90148 9960062 ~ 10001165 (-)
AMCG00007267 NA other downstream 627976 9457488 ~ 9463337 (-)
G22200 NA other downstream 1695089 8393196 ~ 8396224 (-)
G21942 NA other downstream 2584438 7499447 ~ 7506875 (-)
AMCG00007201 NA other downstream 2748972 7324424 ~ 7342341 (-)
AMCG00007299 NA other upstream 55779 10152480 ~ 10246746 (-)
AMCG00007289 bet1l,LOC107740886 other upstream 90607 10187308 ~ 10190204 (-)
AMCG00007298 NA other upstream 168344 10265045 ~ 10272695 (-)
G22838 NA other upstream 3254816 13351517 ~ 13352073 (-)
G22931 LOC100846954 other upstream 3848942 13945643 ~ 13946065 (-)

Expression


Co-expression Network