AMCG00007295


Basic Information

Item Value
gene id AMCG00007295
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 10320340 ~ 10326821 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007295
cacattttatAACACAGAGCAATCGTTTTCACGGCATCTTCTTTCGTGCAAGGATACAAACGTACAGTAACTATATGCAgcttacattattattcaatgctgaccataaatacatttcccagGAGCCTCGGGTTTGGACTGCGAACACGTGCCTCGGTCACATGGGTGTCGAGACTCAAGGGGGACAGTGAACATGGCGGCGCTCACAGAGGCCCGTttcctctctctgcagctgctgctgaagCTGTAGAGTCGAGGAGGCTGATTGACAGTGCAGCGGGGAGTCTGTCGGTCACCACAGAGGAGGCTCAGCAGATTCTTGCTGTCTTTCCAGAAAGCTTCCACTCCAGCCTCAAAAACCTGCTCACCAAGATCCTGCTGGAGCACAGCCCTACCTGGAGAAATGAAGCCGTGTCTAATCAAATTTCGCTGCCTCAGTTAGTGGACATGGACTGGAGGGTGGATATCAAGACAGCCTCAGACTCCATGAACCGCATGGCAGTTCCCACCTGTCTGGTGCAGATGAAGGTGCAGGATGACCCCAGCCTGCGTGGCCCGGCTGCCCTGTCCACTGTGACTTTGGAGCTCAGCAAGGAGACTCTAGACACCATGCTGGATGGGCTGGGGAGGATACGAGACCAGCTGTCTGCTGTGGCGAGCAAATAAAGCTGGACCTGGATTCAGTATTAAGGACCTGTCCCCTTCATTAGCACATTGACTTCTGTGTGCCTAAGCGTGTTGTGCAACAGCCTTCAACTCCAGAGGAATACTAAAGGAAACTGAACTGAAGGTGTTTTGTGCTACTTGCCACTGTCATTGCTCGAACTCTGAGATGATCTACTGCCGAGGCTCCATTGACATCCTACTAGGCCTCCCCCTGCACACATCACACCCGCCTGGGACCAGGAGACTGTGTGTAGACAGTGTGTTGACCTGAGCTcatgtatttcaataaaacGGCAGGTTTAGTAACATTTCAACTAATAGTTCTGTTATTCAGAAAATGGAGCATTggtgtatatattttccatatcaACTGTTGGGTGAACTATGTATAACTAAACCTGCTAGATAAAATGCAGAACCAAAATAAATGCCCTTTTGAACGTTTCataacttttttaaaattgataatAGAAATTCGTCTGTATTTGGAGGTCAGCTAGATCTCTGTGGTCAGTGCTATAGGTTTTTggcagtttttctttattacaaTAACGGATCAAAGTAAGAACAGTCAAAAGTAAGCGAGGTCTTCACTTGTGCcagtttttgtggttttgtttctgaTCCAAAAGCTGATCTTTCTCCAGTAAAGATAGGATAATAGCATCCAAGTTGTTTTGCTTCTCAGCTGGCTCCAGTTCGTCTAAAGTTCCTCCACAGGATTGACCTTTGACACCTAAGTATTTCTGATTTAAACTTAAGCAAAATCTCAGACACCCCGTACAATAagtattgattatatttttcactagCAGTAAACTATATTTAGATAGTCTTTACTTTATACTAATAGAAATGTGTTTCTTCCAAGGTTTTGCATTTATATGATATGACATTGCATTTGTTGATTCCTttagatttaacaaaatatttgacTATATGGAGCTTCATTCGTTTTTCTTCTAACTTGAAATTTCTCTGAAGTTACTCAtgaacttttttaattttttttttttttttttaatgtccagTTTTACAAATCTGAGATTTATTTGTGTGCACAGGTTTATAGTGGGTGACTCTCTGCTCAACTGGAATGTGTAAATAGCTGTGTcatatgcacatttatttttgaataggTTGAAGTCTAAttggatattttaaaaaggacatAGAAATACATCTATACCACATTatgacaaaacataaaaaatgtagctTTGTgccttttaataaaatgtaatttaacaacATCTGTTTCTGAAACAATGTGACTCAGGAAGTGGTTCgtttagtttaattgtattgtgtgaCGTTTTGATGACCACTCTAGAAATCATTACAGTTGGAAATCAAAAGTGTACAGAATCCACAATGTAT

Function

GO: NA

KEGG:

id description
K22565 COMMD9; COMM domain containing 9

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007295 True 2046 mRNA 0.41 6 10320340 10326821

Neighbor

gene id symbol gene type direction distance location
AMCG00007297 NA coding downstream 709 10313591 ~ 10319631 (-)
AMCG00007296 NA coding downstream 60233 10248277 ~ 10260107 (-)
AMCG00007294 sirt3 coding downstream 91638 10219315 ~ 10228702 (-)
AMCG00007290 NA coding downstream 134164 10161452 ~ 10186176 (-)
AMCG00007291 NA coding downstream 223639 10091313 ~ 10096701 (-)
AMCG00007302 NA coding upstream 34880 10361701 ~ 10372947 (-)
AMCG00007309 NA coding upstream 425417 10752238 ~ 10753836 (-)
AMCG00007312 NA coding upstream 1817095 12143916 ~ 12262705 (-)
AMCG00007314 NA coding upstream 1936012 12262833 ~ 12263877 (-)
AMCG00007313 NA coding upstream 1937073 12263894 ~ 12307056 (-)
G22513 NA non-coding downstream 233957 10085760 ~ 10086383 (-)
G22505 NA non-coding downstream 276025 10033128 ~ 10044315 (-)
G22416 alx4,alx4a,LOC107754690,LOC107593440,LOC107683603,LOC103356993 non-coding downstream 679511 9633809 ~ 9640829 (-)
G22415 alx4,LOC107593440,LOC106587508,LOC107688160,LOC107750553,LOC107683603,LOC107754690 non-coding downstream 695462 9624566 ~ 9624878 (-)
G22414 LOC106562319,LOC107683603,LOC107754690,LOC106587508,LOC107750553,LOC107688160 non-coding downstream 721186 9598692 ~ 9599154 (-)
G22619 api5 non-coding upstream 46918 10373739 ~ 10375219 (-)
G22660 NA non-coding upstream 220175 10546996 ~ 10578902 (-)
G22680 clg19h11orf96 non-coding upstream 284368 10611189 ~ 10612988 (-)
G22671 NA non-coding upstream 301527 10628348 ~ 10631934 (-)
G22687 NA non-coding upstream 327353 10654174 ~ 10655530 (-)
AMCG00007298 NA other downstream 47645 10265045 ~ 10272695 (-)
AMCG00007299 NA other downstream 73594 10152480 ~ 10246746 (-)
AMCG00007289 bet1l,LOC107740886 other downstream 130136 10187308 ~ 10190204 (-)
AMCG00007282 NA other downstream 319175 9960062 ~ 10001165 (-)
AMCG00007267 NA other downstream 857003 9457488 ~ 9463337 (-)
G22838 NA other upstream 3024696 13351517 ~ 13352073 (-)
G22931 LOC100846954 other upstream 3618822 13945643 ~ 13946065 (-)
AMCG00007326 pamr1,LOC107570358,LOC107710987,LOC107685072 other upstream 3654553 13981374 ~ 14033212 (-)
AMCG00007366 NA other upstream 5910640 16237461 ~ 16314032 (-)
AMCG00007365 cars,LOC107578099,LOC102789774 other upstream 5994176 16320997 ~ 16345580 (-)

Expression


Co-expression Network