AMCG00007296


Basic Information

Item Value
gene id AMCG00007296
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 10248277 ~ 10260107 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007296
ATGGGTACCAGTACTCCCCTTCCCTGCAGGGGGTCGTGGACATCGGAGGGGGGCAGTTATGGCAGGGCAATGTCCgcagaaaaaaaagaagctgtTGCCATCATTACTGCTGACCCCACAGAGGAGAGCTCTCGTGATAGACAGCCATATGAAAAGCATTTCCCTAAACCAGAAACGGGAGCAGGACAACTATGCCAGGGCAGAGTGGACATGAGCCAACAGAAGCAGCCGAACAGGCCGGTTGTGCTGCAACCATTCAGTCACCCTGGAGACAACTCTTTCCAGGCACCCAGCATGTACCAGGTCTTGTATGACTTCAAAGGAGGTGCACAGATGCTGGATGTAAACAACTCTAACCAGGACCAGAtgaacacactacacactgtgcGGCAGAACCACAAACTTACCAGTCCAGAGCAGCACTATCAAACTCCCCCCCTGACTGACACTGAGGCAAACGACCCTGCTGGGAGCGGAAAAGAAGCTGTTCACCCAGTGACTTCAGCACCAGTGAGGAAGAACATAAGCGCTGCTGTCCAAACCACATGCCAGAATATACCACAGCCGTGTGTGACTGCACCTGGTCTCCCAATCTTCAGACCAGCACTCCACACCCGCCCCTGTCTGATATCCCCTCCACCCTTGATTAGTGATTATGGCTACAACACCCTATCATCATCCTACTTCCCACAGACCTGTCTCGACAGAAATCCTGAGGCGTTTAGACCAAAAATTGGCAGTGGCAAACTCGGAGGGATCAAAGGCCGACACACCAAAGGCTGCAACTGCAAACGCTCCGGCTGCCTTAAAAACTACTGTGAGTGCTATGAGGCCAAGATAATGTGTTCCTCTACCTGTAAATGCCTTGGGTGTAAGAATTACGAGGAGAGCCCTCGAAGAAAGATGAAGGTGTCAGCGAATACAAGTCTCATTAAAACATCGCCATGCCAAAAAAACAGgTATCCTCTTTCATGCATCACGCTTGGTGTAGTGAAAGCCACATGCAGTTGTCTTCTTGCTCAAGCTGAAGAAGCAGAAAAGGAAAGTTATTCTTTGCACCAAGCTGAGAAAATGATTCTCCAGGAGTATGGTCAATGTCTGACGCAAATTGTTCAGTCAATATGGAAATCTGGGACTTTGTATCCCTAGTACCATTGTGTGATACCATGATAAGCAGATCtatatgttttctgttattttgtggTAATGTTTCTTAGTCAGGACAACCTGGTTTAGATTTAATTATATGCACCTAAAAAAtctgtatcattatttttgtttcttgtcatttgaacattttacataaCCTCTACCTGAAACACTTAGTCTAGattttttgtacaaaatcttTAAGTTCTTTCAAGTAcctgaacatttcaaaatgttctaCTCTACGGATGTTAAATTACAGATTCCATTttggctttattttatatatttatttagctgTGGATGACAATTCAGGACAACATAAATGTAGTTACTTATACTACCAGTACACTACTGCATAATGTACATTAGTTATTTAAAGTGTAGGAGTGTAAATTGCTGTAAGtcttaagttatttttaataagctCTTCATAGAATATTTGAGCTGCTTTGTATAAATGATACTTCATAAACAGTGTTAGTTTGTCAGTCTATGctacataataaaacatggtTCATTACGTTGACAAATACAGAGCTCTGgcttaatttaatgtaaagcCTGTGTAATATAATCACACAAATGTATTCTGATCAGGTATGAACCTCTCATCTCTGGTCAGGATTTGGATATAGCAGAAGAAGACAGAGAAGTAAAGGGGAATTTGGCTAGGGTGCGTTTCAGTGCATCCTGGAGGAGGTGGCTGAAAGATAATTAGATGTTGGTGTCAGTGAAGATTAAGAAATGTAAGATTTAGGATTGGAGAGATCAGAAGATCTGAGCATcgtcagcatagaagtggtaggagacaCTGCCAGAGGAAAATCTTAGAACCCTGTGTTAGCTGTTTAGTGTTCAAACGTTACAGCATTAAGCCCTACTTCCAGTTAAGATAAAGATGTGGACGGAAATACGATATTATTTGGGTCAGTGGCGCCTTCTACGGGCAAAAGCTGTATTTGCACTTCTTGATTTaaccttaattatttaaaataataatacttattattaacATCAATTAAggtcttaaataataataataataataataataataataataat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007296 True 2217 mRNA 0.41 9 10248277 10260107

Neighbor

gene id symbol gene type direction distance location
AMCG00007294 sirt3 coding downstream 19575 10219315 ~ 10228702 (-)
AMCG00007290 NA coding downstream 62101 10161452 ~ 10186176 (-)
AMCG00007291 NA coding downstream 151576 10091313 ~ 10096701 (-)
AMCG00007281 LOC105900426,LOC103035847,LOC108428822 coding downstream 192148 10049181 ~ 10056129 (-)
AMCG00007280 LOC107758757,LOC107549278 coding downstream 211160 10035541 ~ 10037117 (-)
AMCG00007297 NA coding upstream 53484 10313591 ~ 10319631 (-)
AMCG00007295 NA coding upstream 60233 10320340 ~ 10326821 (-)
AMCG00007302 NA coding upstream 101594 10361701 ~ 10372947 (-)
AMCG00007309 NA coding upstream 492131 10752238 ~ 10753836 (-)
AMCG00007312 NA coding upstream 1883809 12143916 ~ 12262705 (-)
G22513 NA non-coding downstream 161894 10085760 ~ 10086383 (-)
G22505 NA non-coding downstream 203962 10033128 ~ 10044315 (-)
G22416 alx4,alx4a,LOC107754690,LOC107593440,LOC107683603,LOC103356993 non-coding downstream 607448 9633809 ~ 9640829 (-)
G22415 alx4,LOC107593440,LOC106587508,LOC107688160,LOC107750553,LOC107683603,LOC107754690 non-coding downstream 623399 9624566 ~ 9624878 (-)
G22414 LOC106562319,LOC107683603,LOC107754690,LOC106587508,LOC107750553,LOC107688160 non-coding downstream 649123 9598692 ~ 9599154 (-)
G22619 api5 non-coding upstream 113632 10373739 ~ 10375219 (-)
G22660 NA non-coding upstream 286889 10546996 ~ 10578902 (-)
G22680 clg19h11orf96 non-coding upstream 351082 10611189 ~ 10612988 (-)
G22671 NA non-coding upstream 368241 10628348 ~ 10631934 (-)
G22687 NA non-coding upstream 394067 10654174 ~ 10655530 (-)
AMCG00007299 NA other downstream 1531 10152480 ~ 10246746 (-)
AMCG00007289 bet1l,LOC107740886 other downstream 58073 10187308 ~ 10190204 (-)
AMCG00007282 NA other downstream 247112 9960062 ~ 10001165 (-)
AMCG00007267 NA other downstream 784940 9457488 ~ 9463337 (-)
G22200 NA other downstream 1852053 8393196 ~ 8396224 (-)
AMCG00007298 NA other upstream 4938 10265045 ~ 10272695 (-)
G22838 NA other upstream 3091410 13351517 ~ 13352073 (-)
G22931 LOC100846954 other upstream 3685536 13945643 ~ 13946065 (-)
AMCG00007326 pamr1,LOC107570358,LOC107710987,LOC107685072 other upstream 3721267 13981374 ~ 14033212 (-)
AMCG00007366 NA other upstream 5977354 16237461 ~ 16314032 (-)

Expression


Co-expression Network