AMCG00007297


Basic Information

Item Value
gene id AMCG00007297
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 10313591 ~ 10319631 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007297
cagagacagagattgCCCTGCTTAGAAACAAATCAGAGACACCTGCACTGTAGAAagggagcagcagcagctgggcTGGACATCTGGAGGATCTTCTCTAATGGGGATGAAGAATGTCTGGGAAGATGTggagacacatacagacatggTGCAAAATAGTGTTATCTAGAGAGAAAGCAGATTTactatgaaaaacaagaaagaagcagagagagagatggcaacTGGCTCCTCCTCCCTCAGCAATCAGATTGGAAAGCAGCATGAAAAAAAGGAGAGCACGAGAGAAgaggagctgaaggagaagaTGAGAAAGACCCTGAAGGAAGAGCAACTGAAGAAAGAGACAGATAAATCCACACTGCCTGTCAAAAGAAGGAGCAGGAAGACCCCTCTAATCCCTCCAtcctctccacctcctccactACCTCCATACAtGAGTGGAGGGGCAACTCCAGAGAGAAGCCCAGGAGAGACTCTGAGTCCAGATACTCCAGCGCCTCCCAGTGTCAATGGCAGCTACTACAGCAGCCAGATGTATCAGTCGGCAGAGTCCCAGATCAGACAAGAAGAGTTCctgaaggagaaagagaggaaacaGAGGGAAGAGGAAAGGCTGAGGGAGAAGCAGCGGAATGGAGTGCATAACTGCCTCCAGAGGATAGAGGGGGAGATCCAAAAGCGAAAGGAGATCAGAGCACTGGAGGAGCAGATATCAGTGCTGGAGCAGAGGCTGAGGAAGGAGAGGGatgaggagaggaagagagcaCTGGAGGAGGAGCTGAGCAGAGAGCGAGAGCTGATAGGAAGGctgaagggagagagggagggcatGAGGGAGGAGCGGGAGAGGAGAGAAGTGGAGGAGAGACACAGGAGGGAGAATGAGGAGCTCAGGCAAAGGTATGAGGAAAAGGCCAGAGAGGTGGAGAGATGCAGAGAGGAGATAAAGAGATACAAAGCAGAGATAGAGAGACTCAGTGTGATCGTGGACAGAGCCAGTATGATAGTAATACAGTCCCCTGCGGCAAGAGAGGTCCACAGCCAATTCAGGAGAGTAATGGAGGAGTTAAAGCAGAATTTTAAGGGGAAGGTCAAAGAAGACGCACAAAGTTGTACAATGGTCTTGTTTCTATAGGAGATGTAGGGTCTCAAACATATCATCTTCAATTTGGTTATCACTTGGGAGATGCACAGAATTAAAGAGGAATCTGTTGCTCCTCTAACTATCACGGGGAGACGCAGCAGGCTCTCAAGTGTCTGAACCCTTGTCAAATGCTCAGGCTTTACTCAGGCACTGTGTCACTACAGAGGATGctcacactgagacactggaCCATGCTTTGTGTCCAAGGATTTGTGTTCAAATTCATTAAGTACGTAGGGCAGTGGATGTTGTTATTCACACTGTTGcaagaaaaatgtacacatgATGTATTCACTGAGGGTACCATTCACTCAAAAGTACACTGCAATGCTTTTGTAACAGCAAAATATGTACTTTGTTATAAGGGAA

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007297 True 1516 mRNA 0.48 5 10313591 10319631

Neighbor

gene id symbol gene type direction distance location
AMCG00007296 NA coding downstream 53484 10248277 ~ 10260107 (-)
AMCG00007294 sirt3 coding downstream 84889 10219315 ~ 10228702 (-)
AMCG00007290 NA coding downstream 127415 10161452 ~ 10186176 (-)
AMCG00007291 NA coding downstream 216890 10091313 ~ 10096701 (-)
AMCG00007281 LOC105900426,LOC103035847,LOC108428822 coding downstream 257462 10049181 ~ 10056129 (-)
AMCG00007295 NA coding upstream 709 10320340 ~ 10326821 (-)
AMCG00007302 NA coding upstream 42070 10361701 ~ 10372947 (-)
AMCG00007309 NA coding upstream 432607 10752238 ~ 10753836 (-)
AMCG00007312 NA coding upstream 1824285 12143916 ~ 12262705 (-)
AMCG00007314 NA coding upstream 1943202 12262833 ~ 12263877 (-)
G22513 NA non-coding downstream 227208 10085760 ~ 10086383 (-)
G22505 NA non-coding downstream 269276 10033128 ~ 10044315 (-)
G22416 alx4,alx4a,LOC107754690,LOC107593440,LOC107683603,LOC103356993 non-coding downstream 672762 9633809 ~ 9640829 (-)
G22415 alx4,LOC107593440,LOC106587508,LOC107688160,LOC107750553,LOC107683603,LOC107754690 non-coding downstream 688713 9624566 ~ 9624878 (-)
G22414 LOC106562319,LOC107683603,LOC107754690,LOC106587508,LOC107750553,LOC107688160 non-coding downstream 714437 9598692 ~ 9599154 (-)
G22619 api5 non-coding upstream 54108 10373739 ~ 10375219 (-)
G22660 NA non-coding upstream 227365 10546996 ~ 10578902 (-)
G22680 clg19h11orf96 non-coding upstream 291558 10611189 ~ 10612988 (-)
G22671 NA non-coding upstream 308717 10628348 ~ 10631934 (-)
G22687 NA non-coding upstream 334543 10654174 ~ 10655530 (-)
AMCG00007298 NA other downstream 40896 10265045 ~ 10272695 (-)
AMCG00007299 NA other downstream 66845 10152480 ~ 10246746 (-)
AMCG00007289 bet1l,LOC107740886 other downstream 123387 10187308 ~ 10190204 (-)
AMCG00007282 NA other downstream 312426 9960062 ~ 10001165 (-)
AMCG00007267 NA other downstream 850254 9457488 ~ 9463337 (-)
G22838 NA other upstream 3031886 13351517 ~ 13352073 (-)
G22931 LOC100846954 other upstream 3626012 13945643 ~ 13946065 (-)
AMCG00007326 pamr1,LOC107570358,LOC107710987,LOC107685072 other upstream 3661743 13981374 ~ 14033212 (-)
AMCG00007366 NA other upstream 5917830 16237461 ~ 16314032 (-)
AMCG00007365 cars,LOC107578099,LOC102789774 other upstream 6001366 16320997 ~ 16345580 (-)

Expression


Co-expression Network