AMCG00007310


Basic Information

Item Value
gene id AMCG00007310
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 10758834 ~ 10777707 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007310
CAGGCTCAACAGAAACCCCTGGCAGAGAGTTCCTTTGAAGAAGCTTAAGTGTGTTACAAAGTGCAGAGCTGGAGTAACAACAGAGGCGAAGGATATGCAAGGCTGAGAGCATGACAGTTTTGTCAGCTCCAGTTGCTCAGTATGCACATAGCGAGGTCTGAGCCAGGATCATGGACCACAACAGTATCGTCCAGGAAACTCTGGATCTCTTCTGTAGCTCCTCTGAACAGACATACAAAGAGTTCTTAGGTTCTTTTACATGCCTCTCGAATGGTGACACTGGGAACTGTGGGTTAAAGTCAATATCTGATCGGCCCCTCAAAGTGGCCCCTGTCAGGGAGAAAGACGAAGCCAAGCAGACAGTGCCGGAGGCAGGAACATCGCAGGGCCACGCAGCACTACCTGCAGATCAAGACGAGATGGTCCTGGCCACGGGCATTACAATTGGAGGCTTTCAAGATGGATTGATAAGTCTGGCTGAAAGGGTGAAGTTGGACAACTTTCTGAATTCTCAAGATTTCGGCTACGGTGAAGAAGGTCACCTTAAAATGGAGACAGCTCAGGGGACGCTTCCTGGAGAAGCACAGGATGCACTACCAGCTTATTTTCCATCCTTCCACCAAACTCAGCTTGAGTGCAGTGCAGGGAAGAAGCAGCAAGAGCCTGCGAGCTCAGCCTTCACGGTGGACACAGAGGAGGTGTTCCCATTCTGTATTGATGAGAACTTTGACTATGACCGTGTGGTACTTTCACACAAATACCCCCCCTCAGCACAGGACTGCAGACAACAGCCAGAGACAAACATGTAACCATCACGGTGGAGATGAACAAGCTGCACTGACGTTTCAGGGCTGCTCCACTGGTGGACTTTCTTCAAAAGACATCAGAATGCATCAatgcactgaaaaacaaatacttgtttgttcttaaattaataaattcaaTTTCTCAAAACTAGTAACAGAAACTTGTCCATTCTACAAGTCATTCTTAGTAATGTACAGAATTTGGTAGCAATTCCcagtaaagtaaaatgtaattaaatctattacttatgttcagtaaacaaaaatacttttaattataaGCTGATAAGAAACTCAAGTAATCCAATTACTTGGTTTAAGCCATCCTGATAGAACAAGCAAATCCAAGTAAATTTGTTGTaatgaaaagtaatgaaaagtaaataatagtaatttgtaGTAATATGCAAGTAAATGTTGTAATTGTTATAAGCAAAATATATCCATCTACCAGCCTGCTATTTAAGATATTAATATACTGTAGCATTCTTTGGATCTAATTCAAATATGTTGTCAGTTCATCCCATAAACTGATAAAAGGATGAGGGTTAAAAGAACTGCCAGATAAACCAGAGTGAAAACACACCTCAATGTGAGACTCGCCTTCCCTCCCAATTCTAAATGTTAGCTATTGATGTCAGGTTATTATCTAAGCATGGACAGTACAAGCACAGGCACTGTGATACCCCCTACATCTCAGTCACTCCTTTGGAGACATAAACTGTGATATTTTACAAAGAGTGATTCCAGTAGCaccaaaccaacaaacaaataaaaacataatgtaaagCTTAGTATCAATACCTGGGGTTTAGCAAATAAATCTGCGAATGCCACACGGGGGCAAATGAGAAtgaattgaattattttcttacGAGTATGTTTCATGTCACAAAGCATTTCATGTTCTAAATCACTTAAAACatatgtttctttctcttttaaaataattgcagtCAAAGGCACTTTACATGAAATGTAGAATGTGTCTTATGCACTGCTGCAGAATTGTCTACTCATTTGGTTTGCCATGCTAATGCAGTTATTAGCTCCTTTCGTTTCATCCCATTTGTGCCAAAGCCCTGAAGGGAAACCCACGTGGAGACATGTGGATGGGGTTCAGAAGTTCAGCAATAGTATATCAAGAGTTTTGAAAGTGCATAGCAAATatgcacattttcaattattcacTCCATagtacaatattttgttatacatatttaataccaTCACTTTTCCATTTCTCCTGTGTTGCTTGATGAAGCATTGTAGAAAACATTCAGCAAGAAGAAAATATTAGTGATATCATATGTGAGTTTTGGAACAGATTCTGCTCAATCGGGATGTTTTGACACAGTCTTCAAGTGTAAATGAAGATGAGAGATCATAAAAGCTTTTGTAGTCTTTCACAGCGTCTGTTCCTGTCTCCTCTTCATTGTTGTCTTCAAACAGCAGTGCTTTCTACAATACTTTATATTGTCCAAACAAAACATGCACCAAAATTAgattgaacaaataataattgtgttctTTTTAATCCAAACCAGATGACTAATACATTTGCCAGAGTCCAAAAAAtacaacccccctccccaacccGTTTATTTTACAGCCAAACAAGTGTAGACATTCAGACAAAACCTTCACATAGCCCTTGCACTCGGTATAGCCCTATCCTCTATGTACACTGTAGTGTGAAGTAgcggttagggctctggactctgaagtGTAGgatcatgggttcaatcccaggtgggcgacactgctgctgtgtccttgcacaaggtactttacctagcttgctccagtaaaacacagctgtataaattagTAACTATGTAAGAAAAGGTATAGGAGGTAAttgtgtctgctaagaaatataatatgaaaacCCATTTTTGCTAGATATGGACATTGTTCTTCACATCATTGTTAATATCAATGCTATGATGTTTTCCAGGCTCAGTATATATGTGCTCTTCAACTCTGCCCGAGTTTTACCTGTGTAAACTTGTATAACAGTACAACAGAATTGCTGTAGAGTTTATAATCCAGGTGAATTTAAAAACAGCTCCCCCCTCCACTCTTCATtttgtgtaaattaatttgattctggtttctcactatcttcctgcacctttgttttcctttttttttcaccttttccTTTGACTTTTTTGAAGTCCTTCATTTTCTCCCccagttttcattttgcttcTGAATGCTACATTAACCTGAAAACTCAGGGGGGGCAACAATGGGTATTTCATTTCTGAATGAGGTAGCAGACGAGCTGACACagtcacagaaaaataaaaattactgATTTTTTGACCAAAGTGCTTGTTTAtttcactgagctcttcagccCATTGGTATATAGTCATCATATATAGAGTTTTGCACAggaacatgcacattttgttaCTTTGACACAGGGAAGGCACTACCATCTACAACATagagctttttttatttatgtacaacTGCTTGAACTGGAGAGTTCTGTTGTATGGTCTTTCTGTTTGCTGGGGTATGTGTGTTGCGCTTCATGTGGGGGCTTTTTACACATAAAAGGAACCTTGAGCTCTGAAGCTTTACATGATAAACTTTACATGATAGAAACTACACACTGTAACTATGaacaaataatgataacaacataaaaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007310 True 3477 mRNA 0.39 7 10758834 10777707

Neighbor

gene id symbol gene type direction distance location
AMCG00007306 rag1 coding upstream 15159 10739045 ~ 10743675 (+)
AMCG00007305 NA coding upstream 91539 10660181 ~ 10667295 (+)
AMCG00007308 NA coding upstream 103845 10628350 ~ 10654989 (+)
AMCG00007304 NA coding upstream 149819 10577246 ~ 10609015 (+)
AMCG00007303 NA coding upstream 181670 10534157 ~ 10577164 (+)
AMCG00007311 NA coding downstream 810927 11588634 ~ 11603718 (+)
AMCG00007317 NA coding downstream 2764049 13541756 ~ 13551121 (+)
AMCG00007321 mrpl21,LOC106561938 coding downstream 2845437 13623144 ~ 13624807 (+)
AMCG00007322 NA coding downstream 2868920 13646627 ~ 13647013 (+)
AMCG00007328 NA coding downstream 3197598 13975305 ~ 13981853 (+)
G22652 NA non-coding upstream 73766 10626674 ~ 10685068 (+)
G22596 NA non-coding upstream 436976 10320469 ~ 10321858 (+)
G22528 NA non-coding upstream 517426 10152489 ~ 10241408 (+)
G22417 NA non-coding upstream 1114087 9642597 ~ 9644747 (+)
G22373 NA non-coding upstream 1266167 9488712 ~ 9492667 (+)
G22712 NA non-coding downstream 333636 11111343 ~ 11111723 (+)
G22720 NA non-coding downstream 452118 11229825 ~ 11230393 (+)
G22730 NA non-coding downstream 734446 11512153 ~ 11522358 (+)
G22738 NA non-coding downstream 763276 11540983 ~ 11541524 (+)
G22741 NA non-coding downstream 793245 11570952 ~ 11573862 (+)
AMCG00007307 clg19h11orf96 other upstream 145730 10611196 ~ 10613104 (+)
AMCG00007278 NA other upstream 793567 9936920 ~ 9965267 (+)
G22372 NA other upstream 1259106 9436524 ~ 9499728 (+)
AMCG00007253 calcb,LOC106584617,LOC104951332,LOC107090894,LOC106922915,LOC106950942,LOC103461098 other upstream 2047523 8697983 ~ 8711311 (+)
AMCG00007242 NA other upstream 2307252 8431102 ~ 8451582 (+)
AMCG00007337 NA other downstream 3700966 14478673 ~ 14489692 (+)
AMCG00007352 NA other downstream 4499004 15276711 ~ 15287960 (+)
AMCG00007350 tsg101 other downstream 4588954 15366661 ~ 15379965 (+)
AMCG00007379 NA other downstream 5846683 16624390 ~ 16662700 (+)
AMCG00007417 NA other downstream 7420911 18198618 ~ 18201960 (+)

Expression


Co-expression Network