AMCG00007324


Basic Information

Item Value
gene id AMCG00007324
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 13939340 ~ 13940671 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007324
ATGATAGGAGCCGGGCGCATTTTCAAAGTGCAGCCCAGGGGAGGACAGCTGTGGTCTGTGGTCATGAGGCTCTTGCTGGCGAACTCGCTTGCGGTGCTGTTTCTGTGCGCCTGTGCGTCTGTCCTCTACGTCTGGACCGCCCTGGAAAGCGGGTTGTATCGGCACAAGCGCGGCTTCAGCCACCCGAGGGCGGCTGTATTGCCCGACCTTTCTCCCAAAACTTTCCGAGCCCTGCTCGCTCTGCCCCCGGCGCAGAGACCGCCCTTTTCCCACAACGATCATGCCAATAACTACACTGGTGGCGGTGGGCACCCGGCTGACACCGTCCAACAGAGGAGACAGCCTGATTTCGTTTTAAACGAGAAGGAGGAACTGGCCGGACTGAGCGAGCTGGTAGAGGATGGTATCTTCTGGAGTGAGCGCCTGGAGGCACTGTCGCCAATAGGCTTCAGTGAAGCCCATGCCCGAGCTTGGAGTCAGAAAGCCCGGGCATCTCGGATTGTCTCCCTCGTACCGGGTTGCGGTCGCACGTCTAACCGCCTGGCTAGCTTCTCTGATGGCACGAAGGCATGTGTCAGGTATGGCATCAACGCGGACCAGGTGCAGGGAGAGACGCTCTCCTACTATCTGGCCAGTTTGCTGGGCATTGCCAACCTCCCCCCGCTCGCCCTCTCCCAGGTGAATCCCGGCGGCGAGCAGTGGTCCGGGGTGGAAGAGGACATTGTGGACTTGCATTGGTCCGATTACGCTGTGATGTCTCTCACCGAATGGGTGTCCAACCTGACGGGCGTCATCACCCCGACGCCCCTCCGACAGGAAGGCAGGAGGCTGCACCCGCGGCGGGAGGATCTGGAGAGCAGGACTGTGGCAGAAGTGCTGGAGCTCATGCAGTGGACCGACCTCGTCCTGTTTGATTTCCTGACGGCCAACTTCGACAGGCTGGTCAGCAACCTGTTTAGCCGGCAGTGGGATCCACGGGTGATGGAGAGGGACACCAGTAACCTCCACAGATCTCCGGGGGGCGGCTTGGTGTTCATAGACAACGAGGCAGGGCTGGTCCATGGCTATCGGGTGTTGCACATGTGGGAGAAATACCACAACTCGCTCCTAGCCTCCGTGTGTCTTTTTAGGAGAAGGACCGCAAAGCACATCATAGAGCTGCACCGCCTGCGGGACGCACACAGTCGGCTGCTGGATCTCTACAGAGACAGCGAGCCTCTGGCTGCAGAATTGGGGTTTCTTTCTGACGAGCAGGCTGGGATCCTACAAAGCAGAATAGACCATTTATACAAACACATCCTGAAATGTAAGGGAACCTACAGCCAGCTATAA

Function

GO: NA

KEGG:

id description
K16674 FJX1; four-jointed box protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007324 True 1332 mRNA 0.59 1 13939340 13940671

Neighbor

gene id symbol gene type direction distance location
AMCG00007325 NA coding downstream 27492 13894885 ~ 13911848 (-)
AMCG00007323 NA coding downstream 82943 13743970 ~ 13856397 (-)
AMCG00007318 NA coding downstream 252276 13677981 ~ 13687064 (-)
AMCG00007319 NA coding downstream 324895 13576675 ~ 13614445 (-)
AMCG00007320 NA coding downstream 544914 13392900 ~ 13394426 (-)
AMCG00007330 NA coding upstream 333389 14274060 ~ 14274434 (-)
AMCG00007331 NA coding upstream 345944 14286615 ~ 14326500 (-)
AMCG00007333 NA coding upstream 466473 14407144 ~ 14425504 (-)
AMCG00007340 NA coding upstream 994928 14935599 ~ 14937527 (-)
AMCG00007344 LOC105018338,LOC107562830,LOC107675263,LOC107707530,LOC107085412,LOC103380394,LOC101069290 coding upstream 1211757 15152428 ~ 15153708 (-)
G22902 NA non-coding downstream 289563 13646531 ~ 13649777 (-)
G22901 NA non-coding downstream 308049 13630245 ~ 13631291 (-)
G22819 NA non-coding downstream 945404 12993677 ~ 12993936 (-)
G22794 NA non-coding downstream 1845864 12081746 ~ 12093476 (-)
G22785 NA non-coding downstream 2031846 11907274 ~ 11907494 (-)
G22941 NA non-coding upstream 120099 14060770 ~ 14061129 (-)
G22942 NA non-coding upstream 121063 14061734 ~ 14062135 (-)
G22943 NA non-coding upstream 122824 14063495 ~ 14065298 (-)
G22971 NA non-coding upstream 244031 14184702 ~ 14189688 (-)
G23011 NA non-coding upstream 537925 14478596 ~ 14480199 (-)
G22838 NA other downstream 587267 13351517 ~ 13352073 (-)
AMCG00007298 NA other downstream 3666645 10265045 ~ 10272695 (-)
AMCG00007299 NA other downstream 3692594 10152480 ~ 10246746 (-)
AMCG00007289 bet1l,LOC107740886 other downstream 3749136 10187308 ~ 10190204 (-)
AMCG00007282 NA other downstream 3938175 9960062 ~ 10001165 (-)
G22931 LOC100846954 other upstream 4972 13945643 ~ 13946065 (-)
AMCG00007326 pamr1,LOC107570358,LOC107710987,LOC107685072 other upstream 40703 13981374 ~ 14033212 (-)
AMCG00007366 NA other upstream 2296790 16237461 ~ 16314032 (-)
AMCG00007365 cars,LOC107578099,LOC102789774 other upstream 2380326 16320997 ~ 16345580 (-)
AMCG00007375 NA other upstream 2528796 16469467 ~ 16621905 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G105116 NA non-coding NC_048566.1 CM023220.2 1811581 ~ 1811808 (+)
eurasian perch (Perca fluviatilis) G87876 fjx1 non-coding NC_053119.1 CM020916.1 25351256 ~ 25354124 (-)